RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ITM2BQ9Y287 266 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 PCDHGC4Q9Y5F7 938 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 NEDD8-MDP1E9PL57 170 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 SIN3BO75182 1162 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 ELFN1P0C7U0 828 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 PABPC1P11940 636 aaKnown RBP14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 THOP1P52888 689 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 SLC16A1P53985 500 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 TAS2R39P59534 338 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 TNK2Q07912 1038 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 LDB1Q86U70 411 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 OSBPL6Q9BZF3 934 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 REEP1Q9H902 201 aa14.22□□□□□ -0.13
PCDHGA11-201ENST00000398587 SLC22A3O75751 556 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 TM7SF2O76062 418 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 NTRK1P04629 796 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 UGT2B4P06133 528 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 CACNG1Q06432 222 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 XKR6Q5GH73 641 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 LINGO4Q6UY18 593 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 GSTCDQ8NEC7 633 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 OR8D1Q8WZ84 308 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 DNAJC1Q96KC8 554 aaKnown RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 TPRKBQ9Y3C4 175 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 ABRQ12979 859 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 PLPP4Q5VZY2 271 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 TTC23Q5W5X9 447 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 ASZ1Q8WWH4 475 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 POP5Q969H6 163 aaKnown RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 PHF21AQ96BD5 680 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 TCRBV7S3A2A0A539 114 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 SP100P23497 879 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 ADSLP30566 484 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 SPAM1P38567 509 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 SLC18A1P54219 525 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 EML3Q32P44 896 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 TIGD2Q4W5G0 525 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 SLC9A4Q6AI14 798 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 CIR1Q86X95 450 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 CLP1Q92989 425 aaKnown RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 HOPXQ9BPY8 73 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 PSME2Q9UL46 239 aa14.21□□□□□ -0.13
PCDHGA11-201ENST00000398587 DYTNA2CJ06 578 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 TK2O00142 265 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 PEX1O43933 1283 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 FOXN2P32314 431 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 NRLP54845 237 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 PHKG1Q16816 387 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 SPATA19Q7Z5L4 167 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 OSTM1Q86WC4 334 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 SVOPQ8N4V2 548 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 GLMNQ92990 594 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 C19orf60Q96EN9 201 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 FAM192AQ9GZU8 254 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 CACNA2D2Q9NY47 1150 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 FNIP2Q9P278 1114 aa14.21□□□□□ -0.14
PCDHGA11-201ENST00000398587 NPEPPSL1A6NEC2 478 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 NRP1O14786 923 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 PCYT1AP49585 367 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 KCNJ11Q14654 390 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DLG2Q15700 870 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 MFSD4BQ5TF39 518 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZCCHC8Q6NZY4 707 aaKnown RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 GCNT7Q6ZNI0 430 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 UBE2R2Q712K3 238 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DENND6AQ8IWF6 608 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 FSTL5Q8N475 847 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 GLIS1Q8NBF1 620 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DDHD1Q8NEL9 900 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 AGAP2Q99490 1192 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 C16orf70Q9BSU1 422 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 GPR88Q9GZN0 384 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ARMC7Q9H6L4 198 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 CACNG4Q9UBN1 327 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 SRRDQ9UH36 339 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 RPS6KA6Q9UK32 745 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ENTPD4Q9Y227 616 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 CPQQ9Y646 472 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 A0A088AWK7 358 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DNM1LO00429 736 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 CCL22O00626 93 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 OGNP20774 298 aaKnown RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF10P21506 573 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 FGFR3P22607 806 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 CXCR3P49682 368 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF132P52740 706 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 PROX1Q92786 737 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ROGDIQ9GZN7 287 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 MSRAQ9UJ68 235 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 FBXO10Q9UK96 956 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DUSP12Q9UNI6 340 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 A0A0J9YYE9 177 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 DHRS12A0PJE2 317 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms