RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CSTF2P33240 577 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAB1A-201ENST00000398529 PTPN9P43378 593 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
RAB1A-201ENST00000398529 POLE2P56282 527 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.114e-7■■■■□ 26.2
RAB1A-201ENST00000398529 MAMLD1Q13495 774 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 SERINC3Q13530 473 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 CLCA4Q14CN2 919 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 SLITRK4Q8IW52 837 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 CTNNBL1Q8WYA6 563 aaPredicted RBP14.35□□□□□ -0.11
RAB1A-201ENST00000398529 OR1E3Q8WZA6 343 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 NTAN1Q96AB6 310 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 ASPSCR1Q9BZE9 553 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 TMEM168Q9H0V1 697 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 WDR26Q9H7D7 661 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 RDH14Q9HBH5 336 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 MRPL47Q9HD33 250 aaKnown RBP14.35□□□□□ -0.11
RAB1A-201ENST00000398529 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
RAB1A-201ENST00000398529 TUBD1Q9UJT1 453 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
RAB1A-201ENST00000398529 TSPAN11A1L157 253 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 TMEM202A6NGA9 273 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 ZNF891A8MT65 544 aaPredicted RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 CREB3O43889 395 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 RECQL5O94762 991 aaPredicted RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 NFKBIAP25963 317 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 MMP12P39900 470 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 OR1D5P58170 312 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 TRA2AQ13595 282 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 C16orf72Q14CZ0 275 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 DCUN1D2Q6PH85 259 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 CCDC185Q8N715 623 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 AGBL5Q8NDL9 886 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 ZDHHC1Q8WTX9 485 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 NKD1Q969G9 470 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 FUBP1Q96AE4 644 aaKnown RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 KIAA1143Q96AT1 154 aaPredicted RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 DPYSL5Q9BPU6 564 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 CDH19Q9H159 772 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 FGF22Q9HCT0 170 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 MRPL40Q9NQ50 206 aaKnown RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
RAB1A-201ENST00000398529 REXO2Q9Y3B8 237 aaKnown RBP14.34□□□□□ -0.11
RAB1A-201ENST00000398529 FGF10O15520 208 aaPredicted RBP14.33□□□□□ -0.12
RAB1A-201ENST00000398529 GP1BBP13224 206 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CCL4P13236 92 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 GPD1P21695 349 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 MAN1A1P33908 653 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 GPR3P46089 330 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 B4GALNT1Q00973 533 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 BCL2L1Q07817 233 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 ACOX1Q15067 660 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CYTH1Q15438 398 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CAMK1DQ8IU85 385 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CACNA2D3Q8IZS8 1091 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 PLA2G15Q8NCC3 412 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 RCBTB1Q8NDN9 531 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
RAB1A-201ENST00000398529 VOPP1Q96AW1 172 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 DESI2Q9BSY9 194 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 EFHD1Q9BUP0 239 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 SLC12A9Q9BXP2 914 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 CARS2Q9HA77 564 aaKnown RBP14.33□□□□□ -0.12
RAB1A-201ENST00000398529 PHPT1Q9NRX4 125 aaPredicted RBP14.33□□□□□ -0.12
RAB1A-201ENST00000398529 KCTD5Q9NXV2 234 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 LHX3Q9UBR4 397 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 PCDHGA3Q9Y5H0 932 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 SDK2Q58EX2 2172 aa14.33□□□□□ -0.12
RAB1A-201ENST00000398529 ZFC3H1O60293 1989 aaKnown RBP14.33□□□□□ -0.12
RAB1A-201ENST00000398529 PRSS38A1L453 326 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 TMEM191CA6NGB0 347 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 B4GAT1O43505 415 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 PALMO75781 387 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 CCNB1P14635 433 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 WT1P19544 449 aaPredicted RBP14.32□□□□□ -0.12
RAB1A-201ENST00000398529 CASRP41180 1078 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 VAV2P52735 878 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 AIF1P55008 147 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 HDAC4P56524 1084 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 OGDHQ02218 1023 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 RAB6CQ53S08 254 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 DCAF12Q5T6F0 453 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 PNCKQ6P2M8 343 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 SRLQ86TD4 932 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 UMODL1-AS1Q8N2C9 162 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 CCDC74BQ96LY2 380 aa14.32□□□□□ -0.12
RAB1A-201ENST00000398529 DDA1Q9BW61 102 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms