RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 WNT9AO14904 365 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 RECQL5O94762 991 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 GM2AP17900 193 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ETV3P41162 512 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ELK3P41970 407 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 SPINT3P49223 89 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 CCR5P51681 352 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ZNF140P52738 457 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 TMPRSS15P98073 1019 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 SRSF5Q13243 272 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 SGCGQ13326 291 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ZNF284Q2VY69 593 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ARMC3Q5W041 872 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 Q6ZVL8 140 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 ANKMY2Q8IV38 441 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 OR13C4Q8NGS5 318 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 STYXQ8WUJ0 223 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 LRRC39Q96DD0 335 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 KIFC1Q9BW19 673 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 SLC17A9Q9BYT1 436 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 MRM3Q9HC36 420 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 CHMP2BQ9UQN3 213 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 CBLBQ13191 982 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 SKIDA1Q1XH10 827 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 CES3Q6UWW8 571 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 CEP128Q6ZU80 1094 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 TECPR1Q7Z6L1 1165 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 GSPT2Q8IYD1 628 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 ZBED8Q8IZ13 594 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 EIF1ADQ8N9N8 165 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 CADM4Q8NFZ8 388 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 DTD2Q96FN9 168 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 DNAJC1Q96KC8 554 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 ZNF778Q96MU6 729 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 EBNA1BP2Q99848 306 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 C1QTNF2Q9BXJ5 285 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 PHACTR1Q9C0D0 580 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 TSPYL1Q9H0U9 437 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 PCED1AQ9H1Q7 454 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 NLE1Q9NVX2 485 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 CD84Q9UIB8 345 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 TEX264Q9Y6I9 313 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 CEP192Q8TEP8 1941 aa23.56■■□□□ 1.36
TSPAN4-203ENST00000397397 DOCK9Q9BZ29 2069 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 RGSL1A5PLK6 1076 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 PAK4O96013 591 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 BPIP17213 487 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 NMBRP28336 390 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 VSNL1P62760 191 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 FGL2Q14314 439 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 FASTKD3Q14CZ7 662 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 CCNI2Q6ZMN8 369 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 C11orf74Q86VG3 221 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 IGDCC3Q8IVU1 814 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 RAVER1Q8IY67 606 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 NRSN1Q8IZ57 195 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 ATOH1Q92858 354 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 NUS1Q96E22 293 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 RAD18Q9NS91 495 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 SLC2A6Q9UGQ3 507 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 RIMKLBQ9ULI2 386 aa23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 FNDC3AQ9Y2H6 1198 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-203ENST00000397397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 FAM237BA0A1B0GVD1 139 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 METTL12A8MUP2 240 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 C10orf142B7Z368 130 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 SLC31A1O15431 190 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 HRO43593 1189 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 IGHV4-34P06331 123 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 PGAM1P18669 254 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 MCM3P25205 808 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 CNR2P34972 360 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 CREB5Q02930 508 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 ELF2Q15723 593 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 SETMARQ53H47 684 aaPredicted RBP23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 ALS2CLQ60I27 953 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 ESRP1Q6NXG1 681 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 WDR93Q6P2C0 686 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 CYP2U1Q7Z449 544 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 TMEFF1Q8IYR6 380 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 GPR26Q8NDV2 337 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 FBXO36Q8NEA4 188 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 PYROXD1Q8WU10 500 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 SNX19Q92543 992 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 BIRC7Q96CA5 298 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 CFAP36Q96G28 342 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 WDR83Q9BRX9 315 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 TRIM56Q9BRZ2 755 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 NAT9Q9BTE0 207 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 C1QTNF7Q9BXJ2 289 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 PARD6BQ9BYG5 372 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 KCTD5Q9NXV2 234 aa23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 ZC3H7BQ9UGR2 993 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-203ENST00000397397 CCL22O00626 93 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 LATO43561 262 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 MYBL2P10244 700 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 HADHAP40939 763 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 MAGEA4P43358 317 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 CEP68Q76N32 757 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 LPCAT2Q7L5N7 544 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms