RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 MTSS1O43312 755 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 RASGRP1O95267 797 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 TRBC1P01850 177 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 PROS1P07225 676 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 PDHA1P08559 390 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ZNF30P17039 623 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 GM2AP17900 193 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 KIAA1024LP59773 190 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 COPS2P61201 443 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 E2F1Q01094 437 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 NIPAL4Q0D2K0 466 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 BRD3Q15059 726 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 RPS6KA1Q15418 735 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 PPP2R5EQ16537 467 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 PRRT3Q5FWE3 981 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 KAZNQ674X7 775 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ZCCHC8Q6NZY4 707 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 PNCKQ6P2M8 343 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ENPP7Q6UWV6 458 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 DHRS13Q6UX07 377 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 TMPRSS12Q86WS5 348 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CCDC50Q8IVM0 306 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 FSTL5Q8N475 847 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.57□□□□□ -0.08
SEC13-208ENST00000397109 UBL4BQ8N7F7 174 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CNTD1Q8N815 330 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 TFB1MQ8WVM0 346 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 ALG3Q92685 438 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 P3H4Q92791 437 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 GLMNQ92990 594 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 NUS1Q96E22 293 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 DTD2Q96FN9 168 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 TDRD1Q9BXT4 1180 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 PCDH9Q9HC56 1237 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CHKBQ9Y259 395 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 OR1A2Q9Y585 309 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 EPG5Q9HCE0 2579 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 hCG_1818297A0A087WSY0 165 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CCDC151A5D8V7 595 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 LMO7DNF2Z398 122 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 TNFRSF10CO14798 259 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 ANXA6P08133 673 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CKMT1AP12532 417 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CTSEP14091 401 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 TSHRP16473 764 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CTPS1P17812 591 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 LHCGRP22888 699 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 PTPN7P35236 360 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 HNF1BP35680 557 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CETN2P41208 172 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CD86P42081 329 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 HK3P52790 923 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 RWDD2BP57060 319 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 SRP54P61011 504 aaKnown RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 ZBTB17Q13105 803 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 ELOCQ15369 112 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 GLE1Q53GS7 698 aaKnown RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 TEX44Q53QW1 395 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 TEX35Q5T0J7 233 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 DENND2CQ68D51 928 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 HID1Q8IV36 788 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 RAVER1Q8IY67 606 aaKnown RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 MMGT1Q8N4V1 131 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 PLA2G15Q8NCC3 412 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 HNRNPLLQ8WVV9 542 aaKnown RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 APOLD1Q96LR9 279 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 TMEM121BQ9BXQ6 578 aaPredicted RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 ADGRE3Q9BY15 652 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 WDR26Q9H7D7 661 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 SEPT10Q9P0V9 454 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 KLQ9UEF7 1012 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 RAB21Q9UL25 225 aa14.56□□□□□ -0.08
SEC13-208ENST00000397109 PACSIN2Q9UNF0 486 aaPredicted RBP14.56□□□□□ -0.08
SEC13-208ENST00000397109 C1QTNF9BB2RNN3 333 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 PRLP01236 227 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 TNFP01375 233 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 ALPIP09923 528 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 C1QTNF9P0C862 333 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 TEAD1P28347 426 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 RPIAP49247 311 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 SKOR1P84550 965 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 DPTQ07507 201 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 IHHQ14623 411 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 PRKD1Q15139 912 aaPredicted RBP14.55□□□□□ -0.08
SEC13-208ENST00000397109 SLC14A2Q15849 920 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 ALG11Q2TAA5 492 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 WDR93Q6P2C0 686 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 LVRNQ6Q4G3 990 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 CRTC1Q6UUV9 634 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 HSD11B1LQ7Z5J1 315 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 TSPAN33Q86UF1 283 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 NLRP8Q86W28 1048 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 LRRN4CLQ8ND94 238 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 OR56A4Q8NGH8 313 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 SCG3Q8WXD2 468 aaKnown RBP14.55□□□□□ -0.08
SEC13-208ENST00000397109 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms