RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 CFAP46Q8IYW2 2715 aa18.82■□□□□ 0.6
MCF2L-207ENST00000397024 B4DGG1 531 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 PDE2AO00408 941 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 SOD1P00441 154 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 PRLP01236 227 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 CCNCP24863 283 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 SKOR1P84550 965 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 CDK3Q00526 305 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 IFI16Q16666 785 aaKnown RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 CERCAMQ5T4B2 595 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 SPECC1LQ69YQ0 1117 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 USP45Q70EL2 814 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 WDR36Q8NI36 951 aaKnown RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 GPBAR1Q8TDU6 330 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 SCAMP4Q969E2 229 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 POLR1EQ9GZS1 481 aaKnown RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 ABCG8Q9H221 673 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 DPEP2Q9H4A9 486 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 PHPT1Q9NRX4 125 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-207ENST00000397024 THSD1Q9NS62 852 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 APPL1Q9UKG1 709 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 CHKBQ9Y259 395 aa18.81■□□□□ 0.6
MCF2L-207ENST00000397024 GCN1Q92616 2671 aaKnown RBP18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CCDC187A0A096LP49 1063 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 A0A0J9YYE9 177 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 GOLGA6CA6NDK9 693 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 GOLGA6BA6NDN3 693 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CDRT15L2A8MXV6 281 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 D6RAR5 112 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 PSMD11O00231 422 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 TNFSF15O95150 251 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 TRBC1P01850 177 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 FGF1P05230 155 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 GOLGA6DP0CG33 693 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CCNB1P14635 433 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 GLB1P16278 677 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 KDELR1P24390 212 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 AK4P27144 223 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CXADRP78310 365 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 ARHGEF7Q14155 803 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 HLTFQ14527 1009 aaKnown RBP eCLIP18.8■□□□□ 0.6
MCF2L-207ENST00000397024 MESDQ14696 234 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 C14orf28Q4W4Y0 310 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 LRRC66Q68CR7 880 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 TMPRSS9Q7Z410 1059 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 OR6C4Q8NGE1 309 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 SLC35G2Q8TBE7 412 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 FATE1Q969F0 183 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 AGAP2Q99490 1192 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 CPNE5Q9HCH3 593 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 KCTD5Q9NXV2 234 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 GOLGA6AQ9NYA3 693 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 DTLQ9NZJ0 730 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 LRIT1Q9P2V4 623 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 ATXN7L1Q9ULK2 861 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-207ENST00000397024 SUFUQ9UMX1 484 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 PLEKHM1Q9Y4G2 1056 aa18.8■□□□□ 0.6
MCF2L-207ENST00000397024 SSU72P8A0A1W2PR75 194 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 KLK10O43240 276 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 PRB1P04280 392 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 HLA-DQB2P05538 268 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 KRT7P08729 469 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TMEM253P0C7T8 217 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TEAD1P28347 426 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 GNPDA1P46926 289 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 MAZP56270 477 aaKnown RBP18.79■□□□□ 0.6
MCF2L-207ENST00000397024 DPTQ07507 201 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 RAET1GQ6H3X3 334 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-207ENST00000397024 GPR155Q7Z3F1 870 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 C17orf82Q86X59 251 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-207ENST00000397024 VSTM4Q8IW00 320 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 MAP7D3Q8IWC1 876 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 KCNE4Q8WWG9 221 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 LIN37Q96GY3 246 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-207ENST00000397024 RNF157Q96PX1 679 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 UBL7Q96S82 380 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-207ENST00000397024 EPB41L5Q9HCM4 733 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 SPTLC3Q9NUV7 552 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TAAR2Q9P1P5 351 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 SLC17A4Q9Y2C5 497 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 SSUH2Q9Y2M2 353 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TMEM98Q9Y2Y6 226 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 TTLL3Q9Y4R7 772 aa18.79■□□□□ 0.6
MCF2L-207ENST00000397024 AHCTF1Q8WYP5 2266 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 C3orf70A6NLC5 250 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-207ENST00000397024 B4GAT1O43505 415 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 JCHAINP01591 159 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 TPM3P06753 285 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 MMP2P08253 660 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 HGFP14210 728 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 NFKBIAP25963 317 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 MAN1A1P33908 653 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 STC1P52823 247 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 INHBCP55103 352 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 B4GALNT1Q00973 533 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 TSR1Q2NL82 804 aaKnown RBP18.78■□□□□ 0.6
MCF2L-207ENST00000397024 DOK6Q6PKX4 331 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms