RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TTC33Q6PID6 262 aaPredicted RBP13.93□□□□□ -0.18
NUP98-204ENST00000397004 TMEM74Q96NL1 305 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 BTRCQ9Y297 605 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 OAS3Q9Y6K5 1087 aaKnown RBP13.93□□□□□ -0.18
NUP98-204ENST00000397004 POLD2P49005 469 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 NAA20P61599 178 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ACAP2Q15057 778 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 EXT2Q93063 718 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 PBXIP1Q96AQ6 731 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 L3HYPDHQ96EM0 354 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 CSF3RQ99062 836 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 PAGE1O75459 146 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■■■□ 23.3
NUP98-204ENST00000397004 FUT4P22083 530 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 GALNT1Q10472 559 aaPredicted RBP13.93□□□□□ -0.18
NUP98-204ENST00000397004 BNIP3Q12983 259 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 AFMIDQ63HM1 303 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ZNF554Q86TJ5 538 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 KIAA2013Q8IYS2 634 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 ZUFSPQ96AP4 578 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 HIPK3Q9H422 1215 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 MRM3Q9HC36 420 aaKnown RBP13.93□□□□□ -0.18
NUP98-204ENST00000397004 VWA7Q9Y334 891 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 J3KR12 359 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 UBXN8O00124 270 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CXCL11O14625 94 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 LINC00032P0C843 101 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 TCF3P15923 654 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CD300CQ08708 224 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 ARL13BQ3SXY8 428 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
NUP98-204ENST00000397004 IRAK1BP1Q5VVH5 260 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 LCN8Q6JVE9 175 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 LPPQ93052 612 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 DCKP27707 260 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 PPIL2Q13356 520 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 PAN2Q504Q3 1202 aaKnown RBP13.92□□□□□ -0.18
NUP98-204ENST00000397004 USP51Q70EK9 711 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 TMEM125Q96AQ2 219 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 LRRC58Q96CX6 371 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
NUP98-204ENST00000397004 F8W810 466 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 RASAL1O95294 804 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 HAPLN1P10915 354 aaPredicted RBP13.92□□□□□ -0.18
NUP98-204ENST00000397004 HSD17B1P14061 328 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 ELK4P28324 431 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 HOXC13P31276 330 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CCR3P51677 355 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 AGAP9Q5VTM2 703 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 MINDY1Q8N5J2 469 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 DNAJB14Q8TBM8 379 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 GIPC3Q8TF64 312 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CYGBQ8WWM9 190 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 CASP10Q92851 521 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 SLC30A3Q99726 388 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 VPS45Q9NRW7 570 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 OSER1Q9NX31 292 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 THEGQ9P2T0 379 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 POLG2Q9UHN1 485 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 MED16Q9Y2X0 877 aa13.92□□□□□ -0.18
NUP98-204ENST00000397004 FUCA1P04066 466 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 GFAPP14136 432 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 CD1DP15813 335 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 HERVK_113P63132 956 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ANKRD34AQ69YU3 496 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
NUP98-204ENST00000397004 ROPN1LQ96C74 230 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 FCRL2Q96LA5 508 aaPredicted RBP13.91□□□□□ -0.18
NUP98-204ENST00000397004 FSD1LQ9BXM9 530 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ERVK-6Q9BXR3 956 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 PIF1Q9H611 641 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 NTN4Q9HB63 628 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 DOLKQ9UPQ8 538 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 A0A087WXM4 84 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 J3QRK9 145 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 UPK1AO00322 258 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ZNF182P17025 639 aaPredicted RBP13.91□□□□□ -0.18
NUP98-204ENST00000397004 HRH2P25021 359 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 SLC10A7Q0GE19 358 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 MAPRE2Q15555 327 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 IFNEQ86WN2 208 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 OR6J1Q8NGC5 347 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 TWIST2Q8WVJ9 160 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 MYLPFQ96A32 169 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 FBXL8Q96CD0 374 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 SEZ6LQ9BYH1 1024 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 PLGRKTQ9HBL7 147 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms