RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 USP13Q92995 863 aaPredicted RBP14.94□□□□□ -0.02
CBX3-202ENST00000396386 BHMTQ93088 406 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 MYO19Q96H55 970 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 FAR2Q96K12 515 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 FAM161BQ96MY7 647 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 FKBPLQ9UIM3 349 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 TRPC5OSA6NMA1 111 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PFDN6O15212 129 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 STX7O15400 261 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 ZBTB14O43829 449 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SMIM24O75264 130 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 CIB2O75838 187 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 TM7SF2O76062 418 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 RHOBTB1O94844 696 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 LINC00271P0C7V0 271 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 CD1DP15813 335 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ABL2P42684 1182 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 EPHB1P54762 984 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 HTRA4P83105 476 aaPredicted RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 TIAL1Q01085 375 aaKnown RBP eCLIP14.93□□□□□ -0.023e-11■■□□□ 13.3
CBX3-202ENST00000396386 KLF10Q13118 480 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 MPPE1Q53F39 396 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ATXN7L2Q5T6C5 722 aaPredicted RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 WLSQ5T9L3 541 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 RETSATQ6NUM9 610 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 LILRA6Q6PI73 481 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 FRMD7Q6ZUT3 714 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 NECAB2Q7Z6G3 386 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SCUBE1Q8IWY4 988 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PHTF2Q8N3S3 785 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ENDOVQ8N8Q3 282 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 KDM1BQ8NB78 822 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 KREMEN2Q8NCW0 462 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SMIM14Q96QK8 99 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ZBED2Q9BTP6 218 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 WDR55Q9H6Y2 383 aaPredicted RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 MTF2Q9Y483 593 aaPredicted RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 SLC22A2O15244 555 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ENTPD5O75356 428 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SRP72O76094 671 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 CXCL14O95715 111 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PENKP01210 267 aaPredicted RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 PFKLP17858 780 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 EPHA3P29320 983 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 MC4RP32245 332 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 CPOXP36551 454 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PLK1P53350 603 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SULT2A1Q06520 285 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 KPNB1Q14974 876 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 LSM12Q3MHD2 195 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 AARS2Q5JTZ9 985 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 MPP7Q5T2T1 576 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SWT1Q5T5J6 900 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 ISCA2Q86U28 154 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 BBS7Q8IWZ6 715 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ULK2Q8IYT8 1036 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 KIRREL3Q8IZU9 778 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 KLHL23Q8NBE8 558 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 SH3RF2Q8TEC5 729 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PTERQ96BW5 349 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 L3HYPDHQ96EM0 354 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 PPP1R36Q96LQ0 422 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 TRMOQ9BU70 441 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ASAH2Q9NR71 780 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 TAS2R13Q9NYV9 303 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 ZNF711Q9Y462 761 aa14.93□□□□□ -0.02
CBX3-202ENST00000396386 MTCL1Q9Y4B5 1905 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 MKI67P46013 3256 aaKnown RBP14.93□□□□□ -0.02
CBX3-202ENST00000396386 BPTFQ12830 3046 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 A0A1W2PRU2 124 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 H7C0S8 307 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 FZD6O60353 706 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 COX4I1P13073 169 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 SP100P23497 879 aaPredicted RBP14.92□□□□□ -0.02
CBX3-202ENST00000396386 FMO4P31512 558 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 TTPAP49638 278 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 GALNT1Q10472 559 aaPredicted RBP14.92□□□□□ -0.02
CBX3-202ENST00000396386 ARMC12Q5T9G4 340 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 APCDD1Q8J025 514 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 ACDQ96AP0 544 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 PHF21BQ96EK2 531 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 THTPAQ9BU02 230 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 EMILIN2Q9BXX0 1053 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 TM6SF2Q9BZW4 377 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 EBF2Q9HAK2 575 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 SYTL2Q9HCH5 934 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 PCDH10Q9P2E7 1040 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 NKX1-2Q9UD57 310 aaPredicted RBP14.92□□□□□ -0.02
CBX3-202ENST00000396386 PCDHB9Q9Y5E1 797 aa14.92□□□□□ -0.02
CBX3-202ENST00000396386 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 TMEM233B4DJY2 109 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 GLUD1P00367 558 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 JUNP05412 331 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 HNRNPLP14866 589 aaKnown RBP eCLIP14.91□□□□□ -0.02
CBX3-202ENST00000396386 IMPDH1P20839 514 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 PPARGP37231 505 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms