RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MAFKO60675 156 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 PGLSO95336 258 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 ASMTLO95671 621 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 CSTF2P33240 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDR1-229ENST00000396342 MAN1A1P33908 653 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 GPR3P46089 330 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 CDK3Q00526 305 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDR1-229ENST00000396342 DOK6Q6PKX4 331 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 CCHCR1Q8TD31 782 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 GPBAR1Q8TDU6 330 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 AP2M1Q96CW1 435 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 LGR4Q9BXB1 951 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 HSD3B7Q9H2F3 369 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 TAAR2Q9P1P5 351 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 AMACRQ9UHK6 382 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 RABGEF1Q9UJ41 708 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 A0A1W2PQM1 296 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 AGRPO00253 132 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 HGSO14964 777 aaPredicted RBP16.34■□□□□ 0.21
DDR1-229ENST00000396342 NOBOXO60393 691 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 KRT7P08729 469 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 TPM1P09493 284 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 SLC2A4P14672 509 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 GJC1P36383 396 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 ACTR1BP42025 376 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 UBASH3AP57075 661 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 ACTR1AP61163 376 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 MAXP61244 160 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 ZBED6P86452 979 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 TRA2AQ13595 282 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDR1-229ENST00000396342 LRP8Q14114 963 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 PDK2Q15119 407 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 IFI16Q16666 785 aaKnown RBP16.34■□□□□ 0.21
DDR1-229ENST00000396342 Q6ZVL8 140 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 CTNNBL1Q8WYA6 563 aaPredicted RBP16.34■□□□□ 0.21
DDR1-229ENST00000396342 SGF29Q96ES7 293 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 OR2M4Q96R27 311 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 SEMA3CQ99985 751 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 B3GNT4Q9C0J1 378 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 DEF6Q9H4E7 631 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 PCDH18Q9HCL0 1135 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 ZNHIT6Q9NWK9 470 aaKnown RBP16.34■□□□□ 0.21
DDR1-229ENST00000396342 KCNK4Q9NYG8 393 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 CTTNBP2NLQ9P2B4 639 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 ACSL6Q9UKU0 697 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 SUFUQ9UMX1 484 aa16.34■□□□□ 0.21
DDR1-229ENST00000396342 TDRD6O60522 2096 aaKnown RBP16.34■□□□□ 0.21
DDR1-229ENST00000396342 TTC24A2A3L6 582 aaPredicted RBP16.33■□□□□ 0.2
DDR1-229ENST00000396342 IVLP07476 585 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 HGFP14210 728 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 PLA2G2AP14555 144 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 CTPS1P17812 591 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 IL1R2P27930 398 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.2
DDR1-229ENST00000396342 PDX1P52945 283 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 SKOR1P84550 965 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 DPTQ07507 201 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 TRAF2Q12933 501 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 NR1I3Q14994 352 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 KIAA1614Q5VZ46 1190 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 ALKBH5Q6P6C2 394 aaKnown RBP16.33■□□□□ 0.2
DDR1-229ENST00000396342 HSD11B1LQ7Z5J1 315 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 NRSN1Q8IZ57 195 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-229ENST00000396342 AVL9Q8NBF6 648 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 CCNYQ8ND76 341 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 AGBL5Q8NDL9 886 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 OR10G6Q8NH81 332 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 EXD1Q8NHP7 514 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.33■□□□□ 0.2
DDR1-229ENST00000396342 USP7Q93009 1102 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 SH3KBP1Q96B97 665 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 NAP1L5Q96NT1 182 aaPredicted RBP16.33■□□□□ 0.2
DDR1-229ENST00000396342 ADGRE3Q9BY15 652 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 THAP2Q9H0W7 228 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 TMEM63CQ9P1W3 806 aa16.33■□□□□ 0.2
DDR1-229ENST00000396342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-229ENST00000396342 A0A1W2PNU3 283 aaPredicted RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 NPIPB15A6NHN6 443 aaPredicted RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 B8ZZF3 427 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 STMND1H3BQB6 276 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 ECEL1O95672 775 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 ITGB2P05107 769 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 CEACAM5P06731 702 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 CR2P20023 1033 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 MAZP56270 477 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 OR1D5P58170 312 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 RPL26P61254 145 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 CTBSQ01459 385 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 ZFP36L1Q07352 338 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 LY6DQ14210 128 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 CCDC70Q6NSX1 233 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 ADAMTSL4Q6UY14 1074 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 ZNF765Q7L2R6 523 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 WDFY3Q8IZQ1 3526 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 MCCC1Q96RQ3 725 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms