RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PRDM16Q9HAZ2 1276 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SSU72Q9NP77 194 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SAR1AQ9NR31 198 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 WWOXQ9NZC7 414 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 ZNF487B1APH4 448 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 PRAMEF11O60813 436 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 RPP40O75818 363 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 APOA4P06727 396 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MAGEA11P43364 429 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 CDK7P50613 346 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MRPS22P82650 360 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 LRRC26Q2I0M4 334 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 Q6ZVU0 165 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 TCEAL4Q96EI5 215 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MIPEPQ99797 713 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MYOCQ99972 504 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MRPL57Q9BQC6 102 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 LINC00597Q9H2U6 94 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 KCNK13Q9HB14 408 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 PRAMEF1O95521 474 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MYOGP15173 224 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 LAG3P18627 525 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 RPL34P49207 117 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 RALGDSQ12967 914 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 FLOT2Q14254 428 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 CILP2Q8IUL8 1156 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 ULK2Q8IYT8 1036 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 WFDC5Q8TCV5 224 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 SLC7A6OSQ96CW6 309 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 DCUN1D1Q96GG9 259 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 CDK5RAP1Q96SZ6 601 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 ARHGEF3Q9NR81 526 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 CXXC1Q9P0U4 656 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MTRRQ9UBK8 725 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 BMP1P13497 986 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 GDF5P43026 501 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 MAGEA3P43357 314 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 CLCN5P51795 746 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 IL1RL1Q01638 556 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 PSAPL1Q6NUJ1 521 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 ANGPTL8Q6UXH0 198 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 SPRED2Q7Z698 418 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 HJURPQ8NCD3 748 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 BRSK1Q8TDC3 778 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 GORASP1Q9BQQ3 440 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 HGH1Q9BTY7 390 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 SPATA16Q9BXB7 569 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 SLC8A2Q9UPR5 921 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 RAP2CQ9Y3L5 183 aa15.88■□□□□ 0.13
SMARCD1-202ENST00000394963 LOC285556D6RIA3 1793 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 DOCK6Q96HP0 2047 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 IPO13O94829 963 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 SERPINA6P08185 405 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 COX4I1P13073 169 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 AP2B1P63010 937 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 FAM189BP81408 668 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 TEAD2Q15562 447 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 DNAL1Q4LDG9 190 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 THEMIS2Q5TEJ8 643 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 DENND5AQ6IQ26 1287 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 SLC39A13Q96H72 371 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 LRMDAQ9H2I8 198 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ZFP14Q9HCL3 533 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 CLEC4EQ9ULY5 219 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 OR2AG2A6NM03 316 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 HIDE1A8MVS5 230 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ANKRD66B4E2M5 251 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ITGALP20701 1170 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 PTDSS1P48651 473 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 AGTR2P50052 363 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 KLF10Q13118 480 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 FASTKQ14296 549 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 DBN1Q16643 649 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 KCTD11Q693B1 232 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 KIAA0930Q6ICG6 404 aaPredicted RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 FRMD7Q6ZUT3 714 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 SHKBP1Q8TBC3 707 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ZNF333Q96JL9 665 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 PPP1R2P1Q96PQ5 205 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 C11orf49Q9H6J7 331 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 SUN2Q9UH99 717 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 SQORQ9Y6N5 450 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ANGPT2O15123 496 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 OAS1P00973 400 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 CTSOP43234 321 aaPredicted RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 IL2P60568 153 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ST8SIA6P61647 398 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 DLG1Q12959 904 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 NAB1Q13506 487 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 RBBP5Q15291 538 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 ACSBG2Q5FVE4 666 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 FAM26DQ5JW98 314 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 STEAP4Q687X5 459 aa15.87■□□□□ 0.13
SMARCD1-202ENST00000394963 CENPLQ8N0S6 344 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms