RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SEPT3Q9UH03 358 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 ST14Q9Y5Y6 855 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 LRRK2Q5S007 2527 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.09■□□□□ 0.97
TRAF4-203ENST00000394925 PPM1DO15297 605 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 HEXIM1O94992 359 aaKnown RBP21.09■□□□□ 0.97
TRAF4-203ENST00000394925 VIPR1P32241 457 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 CSTF2P33240 577 aaKnown RBP eCLIP21.09■□□□□ 0.97
TRAF4-203ENST00000394925 ETV3P41162 512 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 POLD2P49005 469 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 CDK3Q00526 305 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 SLC10A7Q0GE19 358 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 LBRQ14739 615 aaKnown RBP21.09■□□□□ 0.97
TRAF4-203ENST00000394925 PPP6R3Q5H9R7 873 aaPredicted RBP21.09■□□□□ 0.97
TRAF4-203ENST00000394925 HSD11B1LQ7Z5J1 315 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 TP53INP2Q8IXH6 220 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 AGBL5Q8NDL9 886 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 CCDC112Q8NEF3 446 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 OR4D9Q8NGE8 314 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 PEBP4Q96S96 227 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 CDH19Q9H159 772 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 SLC39A1Q9NY26 324 aa21.09■□□□□ 0.97
TRAF4-203ENST00000394925 IGHV1OR21-1A0A087WYE8 117 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 EIF3CLB5ME19 914 aaKnown RBP21.08■□□□□ 0.97
TRAF4-203ENST00000394925 CPP00450 1065 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 ADCY8P40145 1251 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 COPB1P53618 953 aaKnown RBP21.08■□□□□ 0.97
TRAF4-203ENST00000394925 POLE2P56282 527 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 KCNAB2Q13303 367 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 TMCO4Q5TGY1 634 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 RAET1GQ6H3X3 334 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 DOK6Q6PKX4 331 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 CACNA2D3Q8IZS8 1091 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 ARFGAP1Q8N6T3 406 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 ZNF564Q8TBZ8 553 aaPredicted RBP21.08■□□□□ 0.97
TRAF4-203ENST00000394925 DTD2Q96FN9 168 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 EIF3CQ99613 913 aaKnown RBP21.08■□□□□ 0.97
TRAF4-203ENST00000394925 FANCLQ9NW38 375 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 KCTD5Q9NXV2 234 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 KCNK4Q9NYG8 393 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 TAS2R14Q9NYV8 317 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 TMEM9Q9P0T7 183 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 PLEKHM1Q9Y4G2 1056 aa21.08■□□□□ 0.97
TRAF4-203ENST00000394925 HTRA2O43464 458 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-203ENST00000394925 THRAP10827 490 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 CSF2RBP32927 897 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 MAMLD1Q13495 774 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 ZNF235Q14590 738 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 SKIDA1Q1XH10 827 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 Q6ZVL8 140 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 FAM129CQ86XR2 697 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 CBARPQ8N350 705 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-203ENST00000394925 DDA1Q9BW61 102 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 ZMYND15Q9H091 742 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 OCIAD1Q9NX40 245 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 SLC17A4Q9Y2C5 497 aa21.07■□□□□ 0.96
TRAF4-203ENST00000394925 A0A1W2PQ67 120 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 TMCO5BA8MYB1 307 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 ATMINO43313 823 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-203ENST00000394925 RAD1O60671 282 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 SOCS5O75159 536 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 IVLP07476 585 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 CYP2A6P11509 494 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-203ENST00000394925 LHCGRP22888 699 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 ACTR1BP42025 376 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 CCR10P46092 362 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 PPM1FP49593 454 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-203ENST00000394925 ACTR1AP61163 376 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 PEX6Q13608 980 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 PTPRRQ15256 657 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 SPOCK2Q92563 424 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 ZNF599Q96NL3 588 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 ASPSCR1Q9BZE9 553 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 EPN3Q9H201 632 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 NOD2Q9HC29 1040 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 PARVAQ9NVD7 372 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 PHTF1Q9UMS5 762 aa21.06■□□□□ 0.96
TRAF4-203ENST00000394925 TRBV23OR9-2A0A075B6M9 112 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 NPIPB15A6NHN6 443 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-203ENST00000394925 EFCAB7A8K855 629 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 ZNF891A8MT65 544 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-203ENST00000394925 PRPSAP2O60256 369 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 NFKBIAP25963 317 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 MIPP30301 263 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 UBXN1Q04323 297 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 TRAF2Q12933 501 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 SQSTM1Q13501 440 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 DCAF12Q5T6F0 453 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 ANKS6Q68DC2 871 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 TMEM71Q6P5X7 295 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 TSPAN33Q86UF1 283 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 ZNF761Q86XN6 746 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-203ENST00000394925 NRSN1Q8IZ57 195 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 PGBD5Q8N414 524 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 NUDCD1Q96RS6 583 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 DPYSL5Q9BPU6 564 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 CWC15Q9P013 229 aaKnown RBP21.05■□□□□ 0.96
TRAF4-203ENST00000394925 TMEM98Q9Y2Y6 226 aa21.05■□□□□ 0.96
TRAF4-203ENST00000394925 RELNP78509 3460 aa21.04■□□□□ 0.96
TRAF4-203ENST00000394925 LGALS16A8MUM7 142 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms