RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 EEF1B2P24534 225 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 RNF19BQ6ZMZ0 732 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 CMC1Q7Z7K0 106 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 SIMC1Q8NDZ2 872 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 TRPV3Q8NET8 790 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 CENPIQ92674 756 aaPredicted RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 PPP1R36Q96LQ0 422 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 DHX35Q9H5Z1 703 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ABCD2Q9UBJ2 740 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 N6AMT1Q9Y5N5 214 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 A0A096LPK6 155 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 A6NL46 340 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 SNRPB2P08579 225 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 CRHBPP24387 322 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 AXLP30530 894 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 PRMT9Q6P2P2 845 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 SNX25Q9H3E2 840 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 NOL6Q9H6R4 1146 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 MRM3Q9HC36 420 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ANKRD6Q9Y2G4 727 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 SYCE1LA8MT33 242 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 MRASO14807 208 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 GABBR2O75899 941 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 HSD17B1P14061 328 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 DNAJB1P25685 340 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 GRIK1P39086 918 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ZBTB6Q15916 424 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 TMC5Q6UXY8 1006 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 KDM1BQ8NB78 822 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ARNTL2Q8WYA1 636 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 TTC9Q92623 222 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 HDAC2Q92769 488 aaKnown RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 C11orf84Q9BUA3 381 aaPredicted RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ACE2Q9BYF1 805 aaPredicted RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 SNTG2Q9NY99 539 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 PTTG1O95997 202 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 JUNP05412 331 aaKnown RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 HTR1BP28222 390 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 NKX2-5P52952 324 aaPredicted RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 COPZ1P61923 177 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 GBE1Q04446 702 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 ZNF181Q2M3W8 571 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 SPANXN3Q5MJ09 141 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 SLC27A1Q6PCB7 646 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 ADGRG5Q8IZF4 528 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 PAPD5Q8NDF8 572 aaKnown RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 MUC13Q9H3R2 512 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 AP4E1Q9UPM8 1137 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 SAGE2PA6NJ88 616 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 NRP1O14786 923 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 GRIA1P42261 906 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 BCAT1P54687 386 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 P2RX3P56373 397 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 FASTKQ14296 549 aaKnown RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 MARCH8Q5T0T0 291 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 C7orf31Q8N865 590 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 FAM110BQ8TC76 370 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 HDAC10Q969S8 669 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 QKIQ96PU8 341 aaKnown RBP eCLIP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 CDK5RAP1Q96SZ6 601 aaKnown RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 RHOBTB2Q9BYZ6 727 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.86■□□□□ 0.61
HOXC6-202ENST00000394331 ACTR3BQ9P1U1 418 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 GTF2IRD1Q9UHL9 959 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 AURKCQ9UQB9 309 aa18.86■□□□□ 0.61
HOXC6-202ENST00000394331 PPEF2O14830 753 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 UPK1BO75841 260 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 RFC2P35250 354 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 EIF2DP41214 584 aaKnown RBP18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CSRP3P50461 194 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 IST1P53990 364 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CDC42EP1Q00587 391 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CLCQ05315 142 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 HEATR6Q6AI08 1181 aaKnown RBP18.85■□□□□ 0.61
HOXC6-202ENST00000394331 TUBA3EQ6PEY2 450 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CCDC81Q6ZN84 652 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 SNX29P2Q8IUI4 249 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 FAM20CQ8IXL6 584 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 RHOXF1Q8NHV9 184 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CERS2Q96G23 380 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 IL12RB2Q99665 862 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 NAALAD2Q9Y3Q0 740 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 NME7Q9Y5B8 376 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 NRP2O60462 931 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 ICMTO60725 284 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 FKBP9O95302 570 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 HADHAP40939 763 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 SLC7A2P52569 658 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CASC4Q6P4E1 433 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 TMEM151AQ8N4L1 468 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 TRIM63Q969Q1 353 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 DHRS9Q9BPW9 319 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CLPBQ9H078 707 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 LRRC40Q9H9A6 602 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 HPS4Q9NQG7 708 aa18.85■□□□□ 0.61
HOXC6-202ENST00000394331 CCDC177Q9NQR7 707 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms