RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CCDC124Q96CT7 223 aaKnown RBP25.58■■□□□ 1.68
SMARCD3-203ENST00000392811 ZBTB26Q9HCK0 441 aa25.58■■□□□ 1.68
SMARCD3-203ENST00000392811 ZNF334Q9HCZ1 680 aaPredicted RBP25.58■■□□□ 1.68
SMARCD3-203ENST00000392811 PLXNA4Q9HCM2 1894 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 ANKRD36A6QL64 1941 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 H0Y626 953 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 PENKP01210 267 aaPredicted RBP25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 URODP06132 367 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 AP2B1P63010 937 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 NFKB2Q00653 900 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 PDAP1Q13442 181 aaKnown RBP25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 HPS6Q86YV9 775 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 FBXW8Q8N3Y1 598 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 AFAP1L2Q8N4X5 818 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 LPGAT1Q92604 370 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 EXT2Q93063 718 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 INSL5Q9Y5Q6 135 aa25.57■■□□□ 1.68
SMARCD3-203ENST00000392811 UBFD1O14562 309 aaKnown RBP25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 SMIM24O75264 130 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 EPHB3P54753 998 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 TRAF2Q12933 501 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 HERC3Q15034 1050 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 OR4D1Q15615 310 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ZNF783Q6ZMS7 281 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 TCEAL8Q8IYN2 117 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ADAMTS19Q8TE59 1207 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 TRMOQ9BU70 441 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ADGRE3Q9BY15 652 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ANKRD66B4E2M5 251 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 H3BMM5 538 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 FKBP6O75344 327 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 SUPT7LO94864 414 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ATP6V1C1P21283 382 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 LPOP22079 712 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 FMO4P31512 558 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ABL2P42684 1182 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 C1QTNF8P60827 252 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 DEFB103AP81534 67 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 CCNIQ14094 377 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 UNC50Q53HI1 259 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 CMPK2Q5EBM0 449 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 PELI3Q8N2H9 469 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 MEAF6Q9HAF1 191 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 RC3H2Q9HBD1 1191 aaKnown RBP25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 LHX3Q9UBR4 397 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 PPM1HQ9ULR3 514 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 POMPQ9Y244 141 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 ATP11BQ9Y2G3 1177 aa25.56■■□□□ 1.68
SMARCD3-203ENST00000392811 RHOBTB1O94844 696 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 LATS1O95835 1130 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 TSPAN8P19075 237 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 CDKN1CP49918 316 aaPredicted RBP25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 CLNS1AP54105 237 aaKnown RBP25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 MTTPP55157 894 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 HERVK_113P63132 956 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 PTPRRQ15256 657 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 ZRSR2Q15696 482 aaKnown RBP25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 TRIM68Q6AZZ1 485 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 NCEH1Q6PIU2 408 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 EFHBQ8N7U6 833 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 ARL14EPQ8N8R7 260 aaPredicted RBP25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 KYQ8NBH2 561 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 RCN3Q96D15 328 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 FEM1AQ9BSK4 669 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 ERVK-6Q9BXR3 956 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 SPG21Q9NZD8 308 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 MED16Q9Y2X0 877 aa25.55■■□□□ 1.68
SMARCD3-203ENST00000392811 GREM1O60565 184 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 NDUFS3O75489 264 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 ARSAP15289 507 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 ZXDBP98169 803 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 SETMARQ53H47 684 aaPredicted RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TCHHL1Q5QJ38 904 aaPredicted RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 DDX53Q86TM3 631 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 DSELQ8IZU8 1212 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TCF12Q99081 682 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TTC1Q99614 292 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TMEM39AQ9NV64 488 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 VPS28Q9UK41 221 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TRAF6Q9Y4K3 522 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 SRP72O76094 671 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 ACADSP16219 412 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 FAM219BQ5XKK7 198 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TXNDC8Q6A555 127 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 AAGABQ6PD74 315 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 C16orf89Q6UX73 402 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 PTGR2Q8N8N7 351 aaPredicted RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 HJURPQ8NCD3 748 aaPredicted RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 TFB2MQ9H5Q4 396 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 IL21Q9HBE4 155 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 S100A14Q9HCY8 104 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 FKBPLQ9UIM3 349 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 FAM50BQ9Y247 325 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 OR51B4Q9Y5P0 310 aa25.54■■□□□ 1.68
SMARCD3-203ENST00000392811 UBXN8O00124 270 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 LUC7L3O95232 432 aaKnown RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 PAQR3Q6TCH7 311 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 CHSY3Q70JA7 882 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 MAB21L3Q8N8X9 362 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 RHEBL1Q8TAI7 183 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms