RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 WDR70Q9NW82 654 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 LUC7L2Q9Y383 392 aaKnown RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TTLL3Q9Y4R7 772 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TEX51A0A1B0GUA7 166 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 PLD2O14939 933 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 UGT1A5P35504 534 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 GARSP41250 739 aaKnown RBP16.56■□□□□ 0.24
PTPRK-208ENST00000392449 GNPDA1P46926 289 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 INHBCP55103 352 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 CDK3Q00526 305 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 GALNT2Q10471 571 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 HLTFQ14527 1009 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPRK-208ENST00000392449 RAB11FIP2Q7L804 512 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 SPRED1Q7Z699 444 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 CLEC14AQ86T13 490 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 TRIM74Q86UV6 250 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 ARL14Q8N4G2 192 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 TEX26Q8N6G2 289 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 FAM71BQ8TC56 605 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 PATE1Q8WXA2 126 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 SCRN2Q96FV2 425 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 MCCC1Q96RQ3 725 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-208ENST00000392449 FRMD8Q9BZ67 464 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-208ENST00000392449 PHPT1Q9NRX4 125 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-208ENST00000392449 LRIT1Q9P2V4 623 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 SUFUQ9UMX1 484 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 PLEKHM1Q9Y4G2 1056 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 CFAP46Q8IYW2 2715 aa16.56■□□□□ 0.24
PTPRK-208ENST00000392449 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 SOD1P00441 154 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 ITGA2BP08514 1039 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 CYP2A6P11509 494 aaPredicted RBP16.55■□□□□ 0.24
PTPRK-208ENST00000392449 CCNB1P14635 433 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 GLB1P16278 677 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 ITIH1P19827 911 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 GBE1Q04446 702 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 CLN3Q13286 438 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 ARHGEF7Q14155 803 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 ANKRD20A8PQ5CZ79 823 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 LRRC66Q68CR7 880 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 SLC30A9Q6PML9 568 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 USP45Q70EL2 814 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 JAMLQ86YT9 394 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 FBXO39Q8N4B4 442 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 SCAMP4Q969E2 229 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 DPH1Q9BZG8 443 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 XPO4Q9C0E2 1151 aaKnown RBP16.55■□□□□ 0.24
PTPRK-208ENST00000392449 RDH14Q9HBH5 336 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
PTPRK-208ENST00000392449 APPL1Q9UKG1 709 aa16.55■□□□□ 0.24
PTPRK-208ENST00000392449 A0A1W2PQ67 120 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 FZD6O60353 706 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 FGF1P05230 155 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 SLC5A2P31639 672 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 SRSF6Q13247 344 aaKnown RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PAFAH1B3Q15102 231 aaKnown RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 ZSCAN23Q3MJ62 389 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 TECPR1Q7Z6L1 1165 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PQLC3Q8N755 202 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 KCTD6Q8NC69 237 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 GPBAR1Q8TDU6 330 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 AGAP2Q99490 1192 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 ABCG8Q9H221 673 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 TAAR2Q9P1P5 351 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PISDQ9UG56 409 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 CHKBQ9Y259 395 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 TMEM98Q9Y2Y6 226 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PROSCO94903 275 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 HLA-DQB2P05538 268 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 CCKBRP32239 447 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 ETV5P41161 510 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 OR1D5P58170 312 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PTSQ03393 145 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 NIPAL4Q0D2K0 466 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 SLC10A2Q12908 348 aaPredicted RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 TGIF1Q15583 401 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 AMZ1Q400G9 498 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 KIAA1614Q5VZ46 1190 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 MARK2Q7KZI7 788 aaKnown RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 OR6C4Q8NGE1 309 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 ZDHHC1Q8WTX9 485 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 MAML1Q92585 1016 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 STRADBQ9C0K7 418 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 POLR1EQ9GZS1 481 aaKnown RBP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 SEMA6CQ9H3T2 930 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 RBM22Q9NW64 420 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PPIL1Q9Y3C6 166 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 LOXL2Q9Y4K0 774 aa16.54■□□□□ 0.24
PTPRK-208ENST00000392449 PSMD11O00231 422 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 PDE2AO00408 941 aaPredicted RBP16.53■□□□□ 0.24
PTPRK-208ENST00000392449 B4GAT1O43505 415 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 ECEL1O95672 775 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 ADCY8P40145 1251 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 GPR1P46091 355 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 UCNP55089 124 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 B4GALNT1Q00973 533 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 CTBSQ01459 385 aa16.53■□□□□ 0.24
PTPRK-208ENST00000392449 VAC14Q08AM6 782 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms