RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 IFI44Q8TCB0 444 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEC3Q8TD91 643 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CPLX3Q8WVH0 158 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ASB12Q8WXK4 309 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 AUTS2Q8WXX7 1259 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SLCO2A1Q92959 643 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PEX13Q92968 403 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FATE1Q969F0 183 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM18Q96B42 140 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 HDAC11Q96DB2 347 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 LINGO1Q96FE5 620 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF496Q96IT1 587 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SHDQ96IW2 340 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA17Q96L03 361 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF597Q96LX8 424 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CEP295NLQ96MC4 621 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NEUROD6Q96NK8 337 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 IPO9Q96P70 1041 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FNBP1Q96RU3 617 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CSF3RQ99062 836 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DNAJC2Q99543 621 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CDC6Q99741 560 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPIN2AQ99865 258 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPAG8Q99932 426 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ATF6BQ99941 703 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 C7orf25Q9BPX7 421 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPIN2BQ9BPZ2 258 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 APOL2Q9BQE5 337 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF649Q9BS31 505 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CHCHD5Q9BSY4 110 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PI4K2AQ9BTU6 479 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ABHD14AQ9BUJ0 271 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NPLQ9BXD5 320 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ACE2Q9BYF1 805 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KRTAP2-4Q9BYR9 128 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KRTAP2-1Q9BYU5 128 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DEFB126Q9BYW3 111 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PITPNM3Q9BZ71 974 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ULBP2Q9BZM5 246 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ADNPQ9H2P0 1102 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TUBB1Q9H4B7 451 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF442Q9H7R0 627 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 COG4Q9H9E3 785 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ACTR5Q9H9F9 607 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ISG20L2Q9H9L3 353 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZMAT3Q9HA38 289 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SEBOXQ9HB31 216 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NOD2Q9HC29 1040 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZBTB20Q9HC78 741 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR6Q9NNW5 1121 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NOX4Q9NPH5 578 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DMRT3Q9NQL9 472 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MAN1C1Q9NR34 630 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 VPS45Q9NRW7 570 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GINM1Q9NU53 330 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ABHD10Q9NUJ1 306 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TDP1Q9NUW8 608 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM30AQ9NV96 361 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM51Q9NW97 253 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RNF186Q9NXI6 227 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SIDT1Q9NXL6 827 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CLEC5AQ9NY25 188 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC2A8Q9NY64 477 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ACTR10Q9NZ32 417 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 C1RLQ9NZP8 487 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DPP7Q9UHL4 492 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SCOCQ9UIL1 159 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 HACL1Q9UJ83 578 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF391Q9UJN7 358 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ASAP1Q9ULH1 1129 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GRID1Q9ULK0 1009 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TPCN1Q9ULQ1 816 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CLEC4EQ9ULY5 219 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PPP1R3CQ9UQK1 317 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TNFSF13BQ9Y275 285 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 INPP5FQ9Y2H2 1132 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MRPS17Q9Y2R5 130 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RAP2CQ9Y3L5 183 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 WSB1Q9Y6I7 421 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 STYXL1Q9Y6J8 313 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CLCA3PQ9Y6N3 262 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MYO10Q9HD67 2058 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 LAMA5O15230 3695 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PIEZO1Q92508 2521 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 BDP1A6H8Y1 2624 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PCNX2A6NKB5 2137 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ICE1Q9Y2F5 2266 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 USP19O94966 1318 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ADGRF5Q8IZF2 1346 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 BIRC6Q9NR09 4857 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TRBV23-1A0A0A0MS06 115 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A0A6YYC8 382 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ABHD14A-ACY1A0A1B0GW23 586 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1B0GWB2 263 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TCRBV16S1A1N1A0A5B0 115 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEB17A8MXT2 336 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 AKR1B15C9JRZ8 316 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 I3L1I5 382 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 K7N7A8 449 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CHL1O00533 1208 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms