RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 MAGEB18Q96M61 343 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 CPEB1Q9BZB8 566 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 IL17CQ9P0M4 197 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 EMCNQ9ULC0 261 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 RIMKLBQ9ULI2 386 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 WASH3PC4AMC7 463 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 TAC1P20366 129 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 MC4RP32245 332 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 SOX9P48436 509 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 MNAT1P51948 309 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 TAS2R39P59534 338 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 RAD51Q06609 339 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 PEX6Q13608 980 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 CDKN3Q16667 212 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 RNF187Q5TA31 235 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 N4BP2L1Q5TBK1 243 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 KIAA0408Q6ZU52 694 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 PIANPQ8IYJ0 282 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 PHTF2Q8N3S3 785 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 SPATA6LQ8N4H0 392 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 ELSPBP1Q96BH3 223 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 TUBGCP5Q96RT8 1024 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 OMDQ99983 421 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 UNKQ9C0B0 810 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 ZFYVE1Q9HBF4 777 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 HACD3Q9P035 362 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 NUMBLQ9Y6R0 609 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 MYO10Q9HD67 2058 aa12.19□□□□□ -0.46
SPTBN1-203ENST00000389980 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 TBC1D3BA6NDS4 549 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 CAPN8A6NHC0 703 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SRRM3A6NNA2 597 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SRPRAP08240 638 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 HMGCLP35914 325 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 MTHFRP42898 656 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 RPL26P61254 145 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 LRIT3Q3SXY7 679 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FASTKD1Q53R41 847 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 PSAPL1Q6NUJ1 521 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 AFTPHQ6ULP2 937 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 TERB1Q8NA31 727 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 E2F7Q96AV8 911 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 OLFM1Q99784 485 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 HEPHQ9BQS7 1158 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 TRMT61BQ9BVS5 477 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 TMEM216Q9P0N5 145 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 RPL26L1Q9UNX3 145 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 PKP3Q9Y446 797 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 USP15Q9Y4E8 981 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SOX1O00570 391 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 ASLP04424 464 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SLC35E2BP0CK96 405 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 PMLP29590 882 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SERPINB4P48594 390 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 ST8SIA6P61647 398 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SATB1Q01826 763 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 PDK4Q16654 411 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 CRTC1Q6UUV9 634 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 CCDC63Q8NA47 563 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 ZNF75CPQ92670 426 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 FBRSL1Q9HCM7 1045 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SLCO1B3Q9NPD5 702 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 PHTF1Q9UMS5 762 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SUFUQ9UMX1 484 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 SLC8A2Q9UPR5 921 aa12.18□□□□□ -0.46
SPTBN1-203ENST00000389980 GLRA3O75311 464 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 STMN1P16949 149 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 BGNP21810 368 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 PSMA3P25788 255 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 CA5AP35218 305 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 CSRP3P50461 194 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 STC1P52823 247 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 METAP1P53582 386 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 CDKN2DP55273 166 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 RAB10P61026 200 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 XIAPP98170 497 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 ZNF234Q14588 700 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 LRRC66Q68CR7 880 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 ZNF549Q6P9A3 640 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 RFLNAQ6ZTI6 216 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 YTHDF3Q7Z739 585 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms