RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PCDHAC2Q9Y5I4 1007 aa2.29□□□□□ -2.04
RNU6-541P-201ENST00000384709 CEPT1Q9Y6K0 416 aa2.29□□□□□ -2.04
RNU6-541P-201ENST00000384709 PDS5AQ29RF7 1337 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 A0A1W2PQF6 199 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 NPIPB15A6NHN6 443 aaPredicted RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 TTC36A6NLP5 189 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 LRRC53A6NM62 1247 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 HNRNPCL2B2RXH8 293 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF432O94892 652 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 IGLV2-11P01706 119 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 AFPP02771 609 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CYC1P08574 325 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 PSMA4P25789 261 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 HOXC9P31274 260 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CLCNKAP51800 687 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 RPL7AP62424 266 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ARL16Q0P5N6 197 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 GRIK2Q13002 908 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 NAE1Q13564 534 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 PPP2R5BQ15173 497 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CCNG2Q16589 344 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 DECR1Q16698 335 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 SYT16Q17RD7 645 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CXorf66Q5JRM2 361 aaPredicted RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 KCNT1Q5JUK3 1230 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 GGNBP1Q5YKI7 109 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 LCN10Q6JVE6 187 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CDC73Q6P1J9 531 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 KCTD18Q6PI47 426 aaPredicted RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 GFRALQ6UXV0 394 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 MEX3BQ6ZN04 569 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 KRBA2Q6ZNG9 492 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 PQLC2Q6ZP29 291 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 C9orf139Q6ZV77 190 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 TMEM219Q86XT9 240 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 NAXEQ8NCW5 288 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 THAP6Q8TBB0 222 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ABTB1Q969K4 478 aaPredicted RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 C3orf30Q96M34 536 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 TTC14Q96N46 770 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CSF3RQ99062 836 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 MPHOSPH8Q99549 860 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 KXD1Q9BQD3 176 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 IFIH1Q9BYX4 1025 aaKnown RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 NUF2Q9BZD4 464 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 USP44Q9H0E7 712 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 MYH16Q9H6N6 1097 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 PPP1R3EQ9H7J1 279 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 PLEKHA5Q9HAU0 1116 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 VEZTQ9HBM0 779 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC6A13Q9NSD5 602 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 UBA2Q9UBT2 640 aaPredicted RBP2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CTNNAL1Q9UBT7 734 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF69Q9UC07 566 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ERVK-11Q9UQG0 969 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 VDAC3Q9Y277 283 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 SNX9Q9Y5X1 595 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 CAPN7Q9Y6W3 813 aa2.28□□□□□ -2.04
RNU6-541P-201ENST00000384709 ARHGEF40Q8TER5 1519 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 ASPDHA6ND91 283 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 BUB3O43684 328 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 SEC14L2O76054 403 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 SEC31AO94979 1220 aaKnown RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 CAMTA2O94983 1202 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 UBL4AP11441 157 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 DGKAP23743 735 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 ICAM3P32942 547 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 DDIT3P35638 169 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 USP8P40818 1118 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 EIF2S3P41091 472 aaKnown RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 PAFAH1B1P43034 410 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 PIP4K2AP48426 406 aaPredicted RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 FUT6P51993 359 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 PITX1P78337 314 aaPredicted RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 SLC20A2Q08357 652 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 DRAP1Q14919 205 aaPredicted RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 CTF1Q16619 201 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 ACCSLQ4AC99 568 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 GORABQ5T7V8 394 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 WDR73Q6P4I2 378 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 BRAT1Q6PJG6 821 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 CACNA2D4Q7Z3S7 1137 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 TDRPQ86YL5 185 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZNF34Q8IZ26 560 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 BEST3Q8N1M1 668 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 POC1AQ8NBT0 407 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 NR4A3Q92570 626 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 RND1Q92730 232 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 TAAR8Q969N4 342 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZUFSPQ96AP4 578 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 FAM149B1Q96BN6 582 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 RRP36Q96EU6 259 aaKnown RBP2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 TMEM19Q96HH6 336 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 TMEM47Q9BQJ4 181 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 C1QTNF5Q9BXJ0 243 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 SLC25A18Q9H1K4 315 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 MMP28Q9H239 520 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 UNC45AQ9H3U1 944 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 SCPEP1Q9HB40 452 aa2.27□□□□□ -2.05
RNU6-541P-201ENST00000384709 DONSONQ9NYP3 566 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms