RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 GTF2H2Q13888 395 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TRIM14Q14142 442 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZNF234Q14588 700 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 POSTNQ15063 836 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KRT24Q2M2I5 525 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MAP9Q49MG5 647 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SGO1Q5FBB7 561 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GTF2H2CQ6P1K8 395 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SLC27A1Q6PCB7 646 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KCTD18Q6PI47 426 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FBXO46Q6PJ61 603 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ATF7IPQ6VMQ6 1270 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LINGO2Q7L985 606 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GPAT4Q86UL3 456 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 HERC6Q8IVU3 1022 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SPAG16Q8N0X2 631 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TM9SF4Q92544 642 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PCYT2Q99447 389 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CD180Q99467 661 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 EYA3Q99504 573 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MTERF1Q99551 399 aaKnown RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TFB2MQ9H5Q4 396 aaKnown RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PPP1R3EQ9H7J1 279 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 UPF2Q9HAU5 1272 aaKnown RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MAGEE1Q9HCI5 957 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PLCB1Q9NQ66 1216 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RASSF1Q9NS23 344 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MAP3K20Q9NYL2 800 aaKnown RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 OGFRQ9NZT2 677 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KIAA1456Q9P272 454 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PEMTQ9UBM1 199 aa2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FBXO9Q9UK97 447 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1040P-201ENST00000383974 HHLA1C9JL84 531 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KLK10O43240 276 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 IGHV4-39P01824 125 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 POU1F1P28069 291 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CLK1P49759 484 aaKnown RBP2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MMP14P50281 582 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LUMP51884 338 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 EFNA5P52803 228 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TERF1P54274 439 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RAD23BP54727 409 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 DSCR10P59022 87 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 EEF1A1P68104 462 aaKnown RBP2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 IRX1P78414 480 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GAGE5Q13069 117 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GAGE6Q13070 117 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PRKG1Q13976 671 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KRT72Q14CN4 511 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 VEPH1Q14D04 833 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TAF11Q15544 211 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TCTN1Q2MV58 587 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 C2orf68Q2NKX9 166 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TUBB8Q3ZCM7 444 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SLC45A4Q5BKX6 768 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 WDR38Q5JTN6 314 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 EEF1A1P5Q5VTE0 462 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 STXBP4Q6ZWJ1 553 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SH2D6Q7Z4S9 175 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZBTB2Q8N680 514 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 STPG4Q8N801 248 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SPPL3Q8TCT6 385 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 STAMBPL1Q96FJ0 436 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SCRN2Q96FV2 425 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MMP25Q9NPA2 562 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LOXL2Q9Y4K0 774 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PRSS21Q9Y6M0 314 aa2.39□□□□□ -2.03
RNU6-1040P-201ENST00000383974 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CTAGE9A4FU28 777 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 NR5A2O00482 541 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PLIN1O60240 522 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PRKNO60260 465 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 IGLV1-44P01699 117 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CNPP09543 421 aaKnown RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CTAGE8P0CG41 777 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PRSS56P0CW18 603 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GNB3P16520 340 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 DDX5P17844 614 aaKnown RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 METAP2P50579 478 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SYCP2LQ5T4T6 812 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 HIST2H2BDQ6DRA6 164 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FAM53AQ6NSI3 398 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FAM171BQ6P995 826 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CCDC174Q6PII3 467 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SUSD1Q6UWL2 747 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RAD9BQ6WBX8 426 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MOGAT3Q86VF5 341 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TMTC1Q8IUR5 882 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 DHX40Q8IX18 779 aaKnown RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CTAGE4Q8IX94 777 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SPATA6LQ8N4H0 392 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZCCHC9Q8N567 271 aaKnown RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LSM14AQ8ND56 463 aaKnown RBP2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 VPS37AQ8NEZ2 397 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TRAPPC12Q8WVT3 735 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TMEM190Q8WZ59 177 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 STAMQ92783 540 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PIGTQ969N2 578 aa2.38□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZNF689Q96CS4 500 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms