RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SQSTM1Q13501 440 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 DPYSL2Q16555 572 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 TP53INP2Q8IXH6 220 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 PDCD6IPQ8WUM4 868 aaKnown RBP17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 SCRN2Q96FV2 425 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 MCCC1Q96RQ3 725 aaPredicted RBP17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 DPYSL5Q9BPU6 564 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 MGME1Q9BQP7 344 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 CNOT8Q9UFF9 292 aaKnown RBP17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 SUFUQ9UMX1 484 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 SLC17A4Q9Y2C5 497 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 PCDHGA3Q9Y5H0 932 aa17.86■□□□□ 0.45
RPUSD3-201ENST00000383820 STMND1H3BQB6 276 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 ECEL1O95672 775 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 FTLP02792 175 aaPredicted RBP17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 ITGB6P18564 788 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 CD1CP29017 333 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 ETV3P41162 512 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 PRKCIP41743 596 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 GNPDA1P46926 289 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 CSRP3P50461 194 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 DPTQ07507 201 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 BIRC2Q13490 618 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 AMZ1Q400G9 498 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 BOLA3Q53S33 107 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 TMCO3Q6UWJ1 677 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 ZNF574Q6ZN55 896 aaPredicted RBP17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 HSD11B1LQ7Z5J1 315 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 VASH2Q86V25 355 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 PGBD5Q8N414 524 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 NSMCE1Q8WV22 266 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 TRIM11Q96F44 468 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 TAAR9Q96RI9 348 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 NUDT22Q9BRQ3 303 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 TRIM7Q9C029 511 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 MRPL47Q9HD33 250 aaKnown RBP17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 AIPL1Q9NZN9 384 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 PPIL1Q9Y3C6 166 aa17.85■□□□□ 0.45
RPUSD3-201ENST00000383820 IGHV5-10-1A0A0J9YXX1 117 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 TTC24A2A3L6 582 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 LRRC53A6NM62 1247 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 AGRPO00253 132 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 MAFKO60675 156 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 MYBL1P10243 752 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 CCL4P13236 92 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 KRT10P13645 584 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 LHCGRP22888 699 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 AK4P27144 223 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 LIMK2P53671 638 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 CDH6P55285 790 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 CTBSQ01459 385 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 TRAF2Q12933 501 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 ASIC2Q16515 512 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 TBR1Q16650 682 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 DENND2CQ68D51 928 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 RAET1GQ6H3X3 334 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 Q6ZVL8 140 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 USP45Q70EL2 814 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 POLNQ7Z5Q5 900 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 NAGSQ8N159 534 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 CCDC112Q8NEF3 446 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 OR4D9Q8NGE8 314 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 ZNF653Q96CK0 615 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 SCARF2Q96GP6 870 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 CDH19Q9H159 772 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
RPUSD3-201ENST00000383820 NPIPB15A6NHN6 443 aaPredicted RBP17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 PYCARD-AS1I3L0S3 204 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 PGLSO95336 258 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 AMPD1P23109 780 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 SERPINB6P35237 376 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ADCY8P40145 1251 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ATP1A2P50993 1020 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ARMC12Q5T9G4 340 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 MARC1Q5VT66 337 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 SLC30A9Q6PML9 568 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ATG14Q6ZNE5 492 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ZNF571Q7Z3V5 609 aaPredicted RBP17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 TECPR1Q7Z6L1 1165 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 NLRP8Q86W28 1048 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 LRRC49Q8IUZ0 686 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 NDUFAF2Q8N183 169 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ATPAF2Q8N5M1 289 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 AGBL5Q8NDL9 886 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 CCDC74BQ96LY2 380 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 CSPG4P5Q96PW8 444 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 SUDS3Q9H7L9 328 aaPredicted RBP17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ETNK2Q9NVF9 386 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 IL17BQ9UHF5 180 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 ST14Q9Y5Y6 855 aa17.83■□□□□ 0.44
RPUSD3-201ENST00000383820 IGHV1OR21-1A0A087WYE8 117 aa17.82■□□□□ 0.44
RPUSD3-201ENST00000383820 GOLGA6CA6NDK9 693 aa17.82■□□□□ 0.44
RPUSD3-201ENST00000383820 GOLGA6BA6NDN3 693 aa17.82■□□□□ 0.44
RPUSD3-201ENST00000383820 DDX3XO00571 662 aaKnown RBP eCLIP17.82■□□□□ 0.442e-8■■■□□ 18.5
RPUSD3-201ENST00000383820 TERTO14746 1132 aaKnown RBP17.82■□□□□ 0.44
RPUSD3-201ENST00000383820 PYGLP06737 847 aa17.82■□□□□ 0.44
RPUSD3-201ENST00000383820 FAM87AP0C7U9 286 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms