RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SERPINA1P01009 418 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CD72P21854 359 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ACADLP28330 430 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RBM34P42696 430 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TKTL1P51854 596 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TAS2R43P59537 309 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 VPS26BQ4G0F5 336 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 BRMS1LQ5PSV4 323 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OGFRL1Q5TC84 451 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CRTC3Q6UUV7 619 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PRSS48Q7RTY5 328 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 C7orf61Q8IZ16 206 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SPATA6LQ8N4H0 392 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ADAM32Q8TC27 787 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 DENND1AQ8TEH3 1009 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PABPC5Q96DU9 382 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRD60Q9BZ19 345 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KLQ9UEF7 1012 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 COL24A1Q17RW2 1714 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 COL2A1P02458 1487 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RPTORQ8N122 1335 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 LOC100653049A0A140TA62 436 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 UBA6A0AVT1 1052 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OR14I1A6ND48 311 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CSF1RP07333 972 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TCF7P36402 384 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 JAM2P57087 298 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF177Q13360 481 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 POLD3Q15054 466 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANO7Q6IWH7 933 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 LRRC55Q6ZSA7 311 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANKFN1Q8N957 763 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ATG16L2Q8NAA4 619 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRD52Q8NB46 1076 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HEXDCQ8WVB3 486 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GMCL1Q96IK5 515 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 EXD2Q9NVH0 621 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SHANK3Q9BYB0 1731 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 BET1O15155 118 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ACOX3O15254 700 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FAM163BP0C2L3 166 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RNH1P13489 461 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MYF6P23409 242 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CTBP2P56545 445 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MRPS10P82664 201 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PLEKHG7Q6ZR37 379 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 STRADAQ7RTN6 431 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MMAAQ8IVH4 418 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FAM71AQ8IYT1 594 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 EID2Q8N6I1 236 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 USP7Q93009 1102 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CD101Q93033 1021 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO32Q969P5 355 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CXorf21Q9HAI6 301 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FAM49BQ9NUQ9 324 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CYTH4Q9UIA0 394 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 AURKCQ9UQB9 309 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MEMO1Q9Y316 297 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MAB21L2Q9Y586 359 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SDK1Q7Z5N4 2213 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ESPL1Q14674 2120 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NPHP3-ACAD11A0A0J9YXS1 232 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SYNDIG1LA6NDD5 238 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 YKT6O15498 198 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ABCB7O75027 752 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PIM1P11309 404 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PRKAR2AP13861 404 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 XRCC1P18887 633 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FKBP1AP62942 108 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KCNJ2P63252 427 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FSTL1Q12841 308 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 EFR3AQ14156 821 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SHROOM1Q2M3G4 852 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FASTKD1Q53R41 847 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 DCAF6Q58WW2 860 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 R3HCC1LQ7Z5L2 792 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SAPCD2Q86UD0 394 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GDPD1Q8N9F7 314 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OR8K5Q8NH50 307 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MCFD2Q8NI22 146 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RFT1Q96AA3 541 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 EIF2AK1Q9BQI3 630 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NUFIP1Q9UHK0 495 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO10Q9UK96 956 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CACNA1BQ00975 2339 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MYMKA6NI61 221 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NAT2P11245 290 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PPP2R1BP30154 601 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CAP2P40123 477 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GRIA3P42263 894 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 APLP1P51693 650 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms