RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CLIP4Q8N3C7 705 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 TMEM151AQ8N4L1 468 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 ACDQ96AP0 544 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 NPLQ9BXD5 320 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 NFKBIZQ9BYH8 718 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 STN1Q9H668 368 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 UBA6A0AVT1 1052 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 ERI2A8K979 691 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 HTRA2O43464 458 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CPB1P15086 417 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 LRPAP1P30533 357 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CLEC14AQ86T13 490 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 PGAM4Q8N0Y7 254 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 PPHLN1Q8NEY8 458 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 DNAJB14Q8TBM8 379 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 GPR22Q99680 433 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CCDC68Q9H2F9 335 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 MRPL46Q9H2W6 279 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CHEK2O96017 543 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CDK18Q07002 472 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 PKN3Q6P5Z2 889 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CUZD1Q86UP6 607 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 GPC2Q8N158 579 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 BLOC1S5Q8TDH9 187 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 STYXQ8WUJ0 223 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 C3orf30Q96M34 536 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 SEPHS2Q99611 448 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 EIF2B3Q9NR50 452 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 EVLQ9UI08 416 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 CPQQ9Y646 472 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
PRPF40B-202ENST00000380281 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 MTHFD1P11586 935 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 IDUAP35475 653 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 CD86P42081 329 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NR4A2P43354 598 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NSUN2Q08J23 767 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PPP1R8Q12972 351 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 USP43Q70EL4 1123 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 SMG8Q8ND04 991 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 MYLPFQ96A32 169 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 CTRCQ99895 268 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 ERVK-11Q9UQG0 969 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 DGKBQ9Y6T7 804 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NUP214P35658 2090 aaPredicted RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 TMEM114B3SHH9 223 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PAGE1O75459 146 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 TBX18O95935 607 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 LINC00032P0C843 101 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 ARNTP27540 789 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 CCR1P32246 355 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NPY2RP49146 381 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 APLP1P51693 650 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NFATC3Q12968 1075 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PLCL1Q15111 1095 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 PDZD8Q8NEN9 1154 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 HM13Q8TCT9 377 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 TRPC4APQ8TEL6 797 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 HDAC10Q969S8 669 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 CNDP1Q96KN2 507 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 FCRL2Q96LA5 508 aaPredicted RBP12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 POLE4Q9NR33 117 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 TMLHEQ9NVH6 421 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 KLHL3Q9UH77 587 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 ACTL7AQ9Y615 435 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 DOCK3Q8IZD9 2030 aa12.46□□□□□ -0.41
PRPF40B-202ENST00000380281 LTBP3Q9NS15 1303 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 CCDC162PA2VCL2 907 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 H3BMM5 538 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 J3KR12 359 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 KPNA4O00629 521 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 SOCS2O14508 198 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 KRT75O95678 551 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 GRIK1P39086 918 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 WNT3AP56704 352 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 DSC2Q02487 901 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 CCL14Q16627 93 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 KYAT1Q16773 422 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 PFKFB4Q16877 469 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 PCID2Q5JVF3 399 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 BTBD8Q5XKL5 378 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 KCTD11Q693B1 232 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 REP15Q6BDI9 236 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms