RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PEX6Q13608 980 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 TECRLQ5HYJ1 363 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 ASRGL1Q7L266 308 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 LYSMD3Q7Z3D4 306 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 KLHL29Q96CT2 875 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 TCF12Q99081 682 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 AARSD1Q9BTE6 412 aaKnown RBP19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 HTATIP2Q9BUP3 242 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 RASSF4Q9H2L5 321 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 CERS4Q9HA82 394 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 IL17CQ9P0M4 197 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 HS3ST2Q9Y278 367 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 MRPS23Q9Y3D9 190 aaKnown RBP19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 WNT6Q9Y6F9 365 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 ANKRD12Q6UB98 2062 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 CBX6O95503 412 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 HOXB8P17481 243 aaPredicted RBP19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC26A3P40879 764 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 SNRPD1P62314 119 aaKnown RBP19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 USP4Q13107 963 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 ACAP2Q15057 778 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 PSAPL1Q6NUJ1 521 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 KLC3Q6P597 504 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 TTC7BQ86TV6 843 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 PIANPQ8IYJ0 282 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 PAF1Q8N7H5 531 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF781Q8N8C0 355 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 ITFG1Q8TB96 612 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 LPGAT1Q92604 370 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 DRC3Q9H069 523 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 FAM96AQ9H5X1 160 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 ATP13A3Q9H7F0 1226 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 PIDD1Q9HB75 910 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 SAR1AQ9NR31 198 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 CDH23Q9H251 3354 aa19.82■□□□□ 0.76
PDLIM5-205ENST00000380180 H7C0S8 307 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 FCHO1O14526 889 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SOCS5O75159 536 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 NDUFS3O75489 264 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 PABPC1P11940 636 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 FMO4P31512 558 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 HMGCLP35914 325 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 RPL26P61254 145 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ERVK-21P61565 698 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SHHQ15465 462 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 MAVSQ7Z434 540 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 RILPQ96NA2 401 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SAMD11Q96NU1 681 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 NMUR2Q9GZQ4 415 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC40A1Q9NP59 571 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ZMYM5Q9UJ78 669 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 RPL26L1Q9UNX3 145 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 PKP3Q9Y446 797 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF106Q9H2Y7 1883 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 A0A0J9YYE9 177 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF195O14628 629 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 TRBC1P01850 177 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 RBP1P09455 135 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 KCNJ2P63252 427 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ACCSLQ4AC99 568 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ZRANB3Q5FWF4 1079 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 FBXW10Q5XX13 1052 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 KIF2BQ8N4N8 673 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 C12orf76Q8N812 135 aaPredicted RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 TXNDC5Q8NBS9 432 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 VOPP1Q96AW1 172 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 ISG20Q96AZ6 181 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 FAM136AQ96C01 138 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SLCO3A1Q9UIG8 710 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC25A13Q9UJS0 675 aa19.81■□□□□ 0.76
PDLIM5-205ENST00000380180 CFAP73A6NFT4 308 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 CEP290O15078 2479 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 BNIP3LO60238 219 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 CHRNGP07510 517 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 TCF3P15923 654 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 SERPINA4P29622 427 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 CCR10P46092 362 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 SUOXP51687 545 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 XIAPP98170 497 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 MYLK3Q32MK0 819 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 C22orf39Q6P5X5 142 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 SMG7Q92540 1137 aaKnown RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 TMEM237Q96Q45 408 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ARHGEF3Q9NR81 526 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 YBX2Q9Y2T7 364 aaKnown RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 TRANK1O15050 2925 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 NEMP2A6NFY4 417 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 SRP72O76094 671 aaKnown RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 POU2F2P09086 479 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ALOX15P16050 662 aaPredicted RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 TFEBP19484 476 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ATP5F1P24539 256 aaPredicted RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ECT2LQ008S8 904 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 PFKPQ01813 784 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 RCN2Q14257 317 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ARL13AQ5H913 290 aaPredicted RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ELMSAN1Q6PJG2 1045 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ISCA2Q86U28 154 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ADIPOR2Q86V24 386 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ZSWIM9Q86XI8 627 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms