RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 C10orf107Q8IVU9 208 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 SCUBE1Q8IWY4 988 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 CDKN2AIPNLQ96HQ2 116 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 ZSWIM3Q96MP5 696 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PANX3Q96QZ0 392 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 OMDQ99983 421 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 CCDC106Q9BWC9 280 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 TM6SF2Q9BZW4 377 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 WWP1Q9H0M0 922 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 NMRAL1Q9HBL8 299 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 MARCH4Q9P2E8 410 aaPredicted RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 TAGLN3Q9UI15 199 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 RUVBL2Q9Y230 463 aaKnown RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 ACOT9Q9Y305 439 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 CHD9Q3L8U1 2897 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 S1PR4O95977 384 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 CPA3P15088 417 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 CRABP2P29373 138 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 POU4F1Q01851 419 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 TAF1AQ15573 450 aaPredicted RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 RIPOR1Q6ZS17 1223 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 GLT6D1Q7Z4J2 308 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 TSC22D3Q99576 134 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 THTPAQ9BU02 230 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 LINC00597Q9H2U6 94 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 ABCB8Q9NUT2 735 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 ZDHHC7Q9NXF8 308 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 DPP7Q9UHL4 492 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 C2orf81A6NN90 581 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 SOBPA7XYQ1 873 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 SPECC1L-ADORA2AF8WAN1 911 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 CD3EAPO15446 510 aaKnown RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 SNNO75324 88 aaPredicted RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 FESP07332 822 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 PLK1P53350 603 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 SLC12A2P55011 1212 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 ZNF460Q14592 562 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 CBX2Q14781 532 aaPredicted RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 SHHQ15465 462 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 ZRSR2Q15696 482 aaKnown RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 RALGPS1Q5JS13 557 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 AP1ARQ63HQ0 302 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 MBLAC2Q68D91 279 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 NET1Q7Z628 596 aaPredicted RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 CRLF3Q8IUI8 442 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 ULK2Q8IYT8 1036 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 TSNARE1Q96NA8 513 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 EBF4Q9BQW3 602 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 C1QTNF1Q9BXJ1 281 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 VCXQ9H320 206 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 CERS4Q9HA82 394 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 NLE1Q9NVX2 485 aaPredicted RBP19.43■□□□□ 0.7
SSU72-204ENST00000378726 SCOCQ9UIL1 159 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 PCDHB9Q9Y5E1 797 aa19.43■□□□□ 0.7
SSU72-204ENST00000378726 PRR5-ARHGAP8B1AHC4 643 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 F8W8V4 182 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 TM7SF2O76062 418 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 PRAMEF12O95522 483 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 FGF3P11487 239 aaPredicted RBP19.42■□□□□ 0.7
SSU72-204ENST00000378726 ARHGAP8P85298 464 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 UBAP2LQ14157 1087 aaKnown RBP19.42■□□□□ 0.7
SSU72-204ENST00000378726 RBM20Q5T481 1227 aaKnown RBP19.42■□□□□ 0.7
SSU72-204ENST00000378726 GALNT7Q86SF2 657 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 OR4K2Q8NGD2 314 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 OR4L1Q8NH43 312 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 ZNF707Q96C28 371 aaPredicted RBP19.42■□□□□ 0.7
SSU72-204ENST00000378726 LMLNQ96KR4 655 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 SAMD11Q96NU1 681 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 NDNQ99608 321 aa19.42■□□□□ 0.7
SSU72-204ENST00000378726 ZNF197O14709 1029 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 COL6A2P12110 1019 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 HLA-FP30511 346 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 CLCN5P51795 746 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ERVK-21P61565 698 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 BIRC2Q13490 618 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 MRNIPQ6NTE8 343 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 APLFQ8IW19 511 aaPredicted RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 GPR150Q8NGU9 434 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 OR6K2Q8NGY2 324 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 KCTD4Q8WVF5 259 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 GATA6Q92908 595 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 IRF7Q92985 503 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 RPL10LQ96L21 214 aaKnown RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 RILPQ96NA2 401 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ZNF184Q99676 751 aaPredicted RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 THAP1Q9NVV9 213 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 SLC7A8Q9UHI5 535 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 EVLQ9UI08 416 aaPredicted RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 NEDD8-MDP1E9PL57 170 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 AHCYL1O43865 530 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 FZD6O60353 706 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ANPEPP15144 967 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ZNF140P52738 457 aaPredicted RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 AP1S1P61966 158 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 PTPRRQ15256 657 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 PITRM1Q5JRX3 1037 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ADGRD2Q7Z7M1 963 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 LCA5Q86VQ0 697 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 MYLK4Q86YV6 388 aaPredicted RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 CAMK1DQ8IU85 385 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms