RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 OR8D1Q8WZ84 308 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 NRBF2Q96F24 287 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 CCDC134Q9H6E4 229 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 AZIN1O14977 448 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 INPP4BO15327 924 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 SLC20A2Q08357 652 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 MAD2L1Q13257 205 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 SELENOMQ8WWX9 145 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ARNTL2Q8WYA1 636 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 DTNAQ9Y4J8 743 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 TRAF6Q9Y4K3 522 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 TRAFD1O14545 582 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 KPNA5O15131 536 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 GJB5O95377 273 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 POP4O95707 220 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CAMK1DQ8IU85 385 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CCDC162PA2VCL2 907 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 MAGEC1O60732 1142 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 NFATC1O95644 943 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 COX4I1P13073 169 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 HGFP14210 728 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 NCALDP61601 193 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 SCAPQ12770 1279 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 KPNB1Q14974 876 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 GPRIN3Q6ZVF9 776 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CUZD1Q86UP6 607 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TTC9BQ8N6N2 239 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CCDC90BQ9GZT6 254 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 MMADHCQ9H3L0 296 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TMEM248Q9NWD8 314 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 FAM32AQ9Y421 112 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 ADAMTSL1Q8N6G6 1762 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 MYO1GB0I1T2 1018 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 RGS14O43566 566 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TP53INP2Q8IXH6 220 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TAGAPQ8N103 731 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 MTFMTQ96DP5 389 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 PCDHB1Q9Y5F3 818 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 COL4A5P29400 1685 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CCDC154A6NI56 674 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 CPSF4O95639 269 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 HOXD8P13378 290 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 SPAM1P38567 509 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 ARMC6Q6NXE6 501 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 C1orf74Q96LT6 269 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 TCF12Q99081 682 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 DUS2Q9NX74 493 aaKnown RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 PACSIN3Q9UKS6 424 aa14.5□□□□□ -0.09
TCOF1-202ENST00000377797 COL11A2P13942 1736 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-202ENST00000377797 INPPL1O15357 1258 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SNUPNO95149 360 aaKnown RBP14.49□□□□□ -0.09
TCOF1-202ENST00000377797 TGDSO95455 350 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ALOX15P16050 662 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-202ENST00000377797 PRKCHP24723 683 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 GRK3P35626 688 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 CACNG1Q06432 222 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ZMIZ2Q8NF64 920 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 HEXDCQ8WVB3 486 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ZNHIT2Q9UHR6 403 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 EVPLQ92817 2033 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 RGSL1A5PLK6 1076 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SYNDIG1LA6NDD5 238 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 COCHO43405 550 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ULK1O75385 1050 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 FTH1P02794 183 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 PRIM2P49643 509 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SEMG2Q02383 582 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 CYP51A1Q16850 503 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SIRPB2Q5JXA9 342 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 FAM171BQ6P995 826 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 TXNDC11Q6PKC3 985 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ALKAL1Q6UXT8 129 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 TSGA13Q96PP4 275 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 OSBPL7Q9BZF2 842 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 WDR41Q9HAD4 459 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ARL8BQ9NVJ2 186 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SH3BP4Q9P0V3 963 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SLC2A6Q9UGQ3 507 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 FAF1Q9UNN5 650 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-202ENST00000377797 NCKAP1Q9Y2A7 1128 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SSC5DA1L4H1 1573 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 QSOX1O00391 747 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ABRQ12979 859 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 DPYSQ14117 519 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 CMTM8Q8IZV2 173 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 CENPIQ92674 756 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-202ENST00000377797 HHIPL1Q96JK4 782 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SH3GL1Q99961 368 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 KATNBL1Q9H079 304 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 TRIM45Q9H8W5 580 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-202ENST00000377797 FAM53CQ9NYF3 392 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 NPEPPSL1A6NEC2 478 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 PRKCGP05129 697 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 FBXO48Q5FWF7 155 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ATAT1Q5SQI0 421 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 ZYG11AQ6WRX3 759 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 WARS2Q9UGM6 360 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms