RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CACNG3O60359 315 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SYNCRIPO60506 623 aaKnown RBP16.51■□□□□ 0.23
TRIM39-201ENST00000376656 RBP1P09455 135 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 AKAP5P24588 427 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 GSK3BP49841 420 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 MAP3K7CLP57077 242 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SH3BP2P78314 561 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 NOMO2Q5JPE7 1267 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 XAF1Q6GPH4 301 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 MIER2Q8N344 545 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 TAMM41Q96BW9 452 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SLC30A3Q99726 388 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 YTHDF1Q9BYJ9 559 aaKnown RBP16.51■□□□□ 0.23
TRIM39-201ENST00000376656 OR12D3Q9UGF7 316 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 USP22Q9UPT9 525 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
TRIM39-201ENST00000376656 NRCAMQ92823 1304 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 DFFAO00273 331 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 PMPCBO75439 489 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 FCGR1AP12314 374 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 IDUAP35475 653 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 FOXA1P55317 472 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 MTA1Q13330 715 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 TRIM16LQ309B1 348 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 OTUD3Q5T2D3 398 aaPredicted RBP16.51■□□□□ 0.23
TRIM39-201ENST00000376656 CLEC20AQ6ZU45 233 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 EXT2Q93063 718 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 SEPHS2Q99611 448 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 PSME2Q9UL46 239 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 PIP5K1BO14986 540 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 LGALS2P05162 132 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 DPEP1P16444 411 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 NR4A1P22736 598 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 HOXA11P31270 313 aaPredicted RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 BAG6P46379 1132 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TMEM207Q6UWW9 146 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 GADL1Q6ZQY3 521 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 KLHDC8BQ8IXV7 354 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TMEM125Q96AQ2 219 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 KLK14Q9P0G3 267 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 B3GNT3Q9Y2A9 372 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 VWA7Q9Y334 891 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 PIRO00625 290 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 HUS1O60921 280 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 OPRL1P41146 370 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 KPNA1P52294 538 aaPredicted RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 RPS3AP61247 264 aaKnown RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ACAP2Q15057 778 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 FUT11Q495W5 492 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 UBXN10Q96LJ8 280 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ALG2Q9H553 416 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 DGKBQ9Y6T7 804 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 LRRC14BA6NHZ5 514 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 LDLRP01130 860 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 JUNBP17275 347 aaPredicted RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 CES1P23141 567 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 JAK1P23458 1154 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 AIF1P55008 147 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 DCAF4L1Q3SXM0 396 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 GPR158Q5T848 1215 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 KIAA0930Q6ICG6 404 aaPredicted RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ITIH5Q86UX2 942 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 CLYBLQ8N0X4 340 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TMCO5AQ8N6Q1 288 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TNIP3Q96KP6 325 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 KCNA7Q96RP8 456 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 TKTL2Q9H0I9 626 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 DAPK2Q9UIK4 370 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 SLC27A5Q9Y2P5 690 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 FAM32AQ9Y421 112 aaKnown RBP16.5■□□□□ 0.23
TRIM39-201ENST00000376656 ANKRD12Q6UB98 2062 aa16.5■□□□□ 0.23
TRIM39-201ENST00000376656 RECQL4O94761 1208 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 ALBP02768 609 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 GEN1Q17RS7 908 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 CCDC92Q53HC0 331 aaPredicted RBP16.49■□□□□ 0.23
TRIM39-201ENST00000376656 HECTD2Q5U5R9 776 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 LDB1Q86U70 411 aaPredicted RBP16.49■□□□□ 0.23
TRIM39-201ENST00000376656 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 ABHD11Q8NFV4 315 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
TRIM39-201ENST00000376656 RAB2BQ8WUD1 216 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 EDEM1Q92611 657 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 MED10Q9BTT4 135 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 TRMOQ9BU70 441 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 COLEC11Q9BWP8 271 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 GPN2Q9H9Y4 310 aaPredicted RBP16.49■□□□□ 0.23
TRIM39-201ENST00000376656 GLOD4Q9HC38 313 aa16.49■□□□□ 0.23
TRIM39-201ENST00000376656 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms