RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RECQLP46063 649 aaPredicted RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 HECTD2Q5U5R9 776 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 TAX1BP1Q86VP1 789 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 CACNA2D3Q8IZS8 1091 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 EID2BQ96D98 161 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 PLEKHG4BQ96PX9 1271 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 MYADMQ96S97 322 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 AARSD1Q9BTE6 412 aaKnown RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 COPG2Q9UBF2 871 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 COL4A2P08572 1712 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 EBAG9O00559 213 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 C7P10643 843 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 TAS2R39P59534 338 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 DCDC1P59894 354 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 ENPP2Q13822 863 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 SEMA3AQ14563 771 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 PPM1JQ5JR12 505 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 CMC1Q7Z7K0 106 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 ZSWIM9Q86XI8 627 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 NUDCD3Q8IVD9 361 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 SLC41A1Q8IVJ1 513 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 CENPLQ8N0S6 344 aaPredicted RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 CCDC197Q8NCU1 140 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 ACVR1CQ8NER5 493 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 STON2Q8WXE9 905 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 SUSD6Q92537 303 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 ELMO2Q96JJ3 720 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 TSNARE1Q96NA8 513 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 NMRAL1Q9HBL8 299 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 MLXIPLQ9NP71 852 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 FBXO6Q9NRD1 293 aaPredicted RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 IL36AQ9UHA7 158 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
PDPN-202ENST00000376057 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
PDPN-202ENST00000376057 EDDM13A0A1B0GTR0 161 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CYP2A6P11509 494 aaPredicted RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 OPRD1P41143 372 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SLC12A2P55011 1212 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ST8SIA6P61647 398 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PCLAFQ15004 111 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ACAP2Q15057 778 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CRY1Q16526 586 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ZNF549Q6P9A3 640 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CRTC1Q6UUV9 634 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ZYG11AQ6WRX3 759 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SNX20Q7Z614 316 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 MRPL57Q9BQC6 102 aaKnown RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 TMEM245Q9H330 911 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 FGFR1OP2Q9NVK5 253 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 KLHL42Q9P2K6 505 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PCDHB1Q9Y5F3 818 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 MYOFQ9NZM1 2061 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 TMEM114B3SHH9 223 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 G3V2L1 256 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 GAPDHSO14556 408 aaPredicted RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 TBX10O75333 385 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ESR1P03372 595 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PIRTP0C851 137 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 HNRNPLP14866 589 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDPN-202ENST00000376057 MC4RP32245 332 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 DNAJB13P59910 316 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 TIAL1Q01085 375 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDPN-202ENST00000376057 ZNF805Q5CZA5 627 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 ZNF789Q5FWF6 425 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SPDYAQ5MJ70 313 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 CGB2Q6NT52 195 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SPATA21Q7Z572 469 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 YAF2Q8IY57 180 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 TERB1Q8NA31 727 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PDCD6IPQ8WUM4 868 aaKnown RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 UCMAQ8WVF2 138 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDPN-202ENST00000376057 TTC1Q99614 292 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 P2RY12Q9H244 342 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 SUDS3Q9H7L9 328 aaPredicted RBP11.09□□□□□ -0.63
PDPN-202ENST00000376057 CAB39LQ9H9S4 337 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 IGSF5Q9NSI5 407 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 THAP1Q9NVV9 213 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PLA2G4CQ9UP65 541 aa11.09□□□□□ -0.63
PDPN-202ENST00000376057 PSMD11O00231 422 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 RBP1P09455 135 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 CPA3P15088 417 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 ALDH3A1P30838 453 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 LTBRP36941 435 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms