RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 C9orf172C9J069 976 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 WISP1O95388 367 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 PEX11BO96011 259 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 PYGLP06737 847 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 ALDH4A1P30038 563 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 ETV5P41161 510 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 SQSTM1Q13501 440 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 LINC00303Q3SY05 128 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 FILIP1LQ4L180 1135 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 NRROSQ86YC3 692 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 ATPAF2Q8N5M1 289 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 EXD3Q8N9H8 876 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 MCCC1Q96RQ3 725 aaPredicted RBP23.17■■□□□ 1.3
C9orf47-202ENST00000375850 CDH19Q9H159 772 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 SEMA6CQ9H3T2 930 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 NOD2Q9HC29 1040 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 SUFUQ9UMX1 484 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 PCDHGA4Q9Y5G9 962 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 PCDHGA3Q9Y5H0 932 aa23.17■■□□□ 1.3
C9orf47-202ENST00000375850 STMND1H3BQB6 276 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 MAFKO60675 156 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 PGLSO95336 258 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 ETV3P41162 512 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 GNPDA1P46926 289 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 ATP1A2P50993 1020 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 MAZP56270 477 aaKnown RBP23.16■■□□□ 1.3
C9orf47-202ENST00000375850 C16orf72Q14CZ0 275 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 AMZ1Q400G9 498 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 ARMC12Q5T9G4 340 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 MARC1Q5VT66 337 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 RAET1GQ6H3X3 334 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 TMPRSS9Q7Z410 1059 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 POLNQ7Z5Q5 900 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 NLRP8Q86W28 1048 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 ZFAND4Q86XD8 727 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 SFTPA2Q8IWL1 248 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 PELI3Q8N2H9 469 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 NSMCE3Q96MG7 304 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 TAAR9Q96RI9 348 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 TRIM7Q9C029 511 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 RDH14Q9HBH5 336 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 STARD5Q9NSY2 213 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 FOXJ2Q9P0K8 574 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 DNPEPQ9ULA0 475 aa23.16■■□□□ 1.3
C9orf47-202ENST00000375850 ECEL1O95672 775 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 MMP13P45452 471 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 OR1D5P58170 312 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 KLHL30Q0D2K2 578 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 NFATC3Q12968 1075 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 PIGHQ14442 188 aaPredicted RBP23.15■■□□□ 1.3
C9orf47-202ENST00000375850 PRICKLE2Q7Z3G6 844 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 ZNF571Q7Z3V5 609 aaPredicted RBP23.15■■□□□ 1.3
C9orf47-202ENST00000375850 RAVER1Q8IY67 606 aaKnown RBP23.15■■□□□ 1.3
C9orf47-202ENST00000375850 AOPEPQ8N6M6 819 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 OR4D9Q8NGE8 314 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 TEKT4Q8WW24 435 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 EXTL1Q92935 676 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 SCARF2Q96GP6 870 aaPredicted RBP23.15■■□□□ 1.3
C9orf47-202ENST00000375850 CSPG4P5Q96PW8 444 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 HAUS2Q9NVX0 235 aa23.15■■□□□ 1.3
C9orf47-202ENST00000375850 UNC13CQ8NB66 2214 aa23.14■■□□□ 1.3
C9orf47-202ENST00000375850 TENM4Q6N022 2769 aa23.14■■□□□ 1.3
C9orf47-202ENST00000375850 IGHV5-10-1A0A0J9YXX1 117 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 LHCGRP22888 699 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 AMPD1P23109 780 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 CD1CP29017 333 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 ADCY8P40145 1251 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 CSRP3P50461 194 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 LIMK2P53671 638 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 CTBSQ01459 385 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 TRAF2Q12933 501 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 LRP8Q14114 963 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 CCDC183Q5T5S1 534 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 DENND2CQ68D51 928 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 SLC30A9Q6PML9 568 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 ADAMTSL4Q6UY14 1074 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 Q6ZVL8 140 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 ZNF765Q7L2R6 523 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 HSD11B1LQ7Z5J1 315 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 TP53INP2Q8IXH6 220 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 PGBD5Q8N414 524 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 AGBL5Q8NDL9 886 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 COL26A1Q96A83 441 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 BPIFA3Q9BQP9 254 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 ISCUQ9H1K1 167 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.14■■□□□ 1.29
C9orf47-202ENST00000375850 RCOR3Q9P2K3 495 aaPredicted RBP23.14■■□□□ 1.29
C9orf47-202ENST00000375850 ANKRD36A6QL64 1941 aa23.14■■□□□ 1.29
C9orf47-202ENST00000375850 PIEZO2Q9H5I5 2752 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 GOLGA6CA6NDK9 693 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 GOLGA6BA6NDN3 693 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 NPIPB15A6NHN6 443 aaPredicted RBP23.13■■□□□ 1.29
C9orf47-202ENST00000375850 SMTNL1A8MU46 457 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 DDX3XO00571 662 aaKnown RBP eCLIP23.13■■□□□ 1.29
C9orf47-202ENST00000375850 MBD3O95983 291 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 FUCA1P04066 466 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 GOLGA6DP0CG33 693 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 ZNF30P17039 623 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 CES1P23141 567 aa23.13■■□□□ 1.29
C9orf47-202ENST00000375850 GPR1P46091 355 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms