RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TSSK3Q96PN8 268 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 COPS8Q99627 209 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 TPRKBQ9Y3C4 175 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 GMPPBQ9Y5P6 360 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 CYP2C18P33260 490 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 PTPN5P54829 565 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ZNF398Q8TD17 642 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 MAP4K5Q9Y4K4 846 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 OTCP00480 354 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 GJA1P17302 382 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 MTX3Q5HYI7 312 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 FUT10Q6P4F1 479 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.14■□□□□ 0.33
MCF2L-203ENST00000375604 PTCH2Q9Y6C5 1203 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 STATHP02808 62 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 CXCR2P25025 360 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 PLEKHG4Q58EX7 1191 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 INTS6LQ5JSJ4 861 aaKnown RBP17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 TMEM192Q8IY95 271 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 SCAMP5Q8TAC9 235 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 PPCDCQ96CD2 204 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ZNF354BQ96LW1 612 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 GLOD4Q9HC38 313 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 EHD3Q9NZN3 535 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 FBXO5Q9UKT4 447 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 SAP18O00422 153 aaKnown RBP17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ENTPD5O75356 428 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 FSBPO95073 299 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ZNF540Q8NDQ6 660 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 ESAMQ96AP7 390 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 TMEM216Q9P0N5 145 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 PSME2Q9UL46 239 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 VWA7Q9Y334 891 aa17.14■□□□□ 0.33
MCF2L-203ENST00000375604 SLC31A1O15431 190 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 DDX3YO15523 660 aaKnown RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 CILPO75339 1184 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 CDC73Q6P1J9 531 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 SMYD1Q8NB12 490 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 PHF10Q8WUB8 498 aaKnown RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 CDH19Q9H159 772 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 SPAG4Q9NPE6 437 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 MCIDASD6RGH6 385 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 AZIN1O14977 448 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 SIN3BO75182 1162 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 RBFAQ8N0V3 343 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 OR6C75A6NL08 312 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ATL1Q8WXF7 558 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.333e-8■■■□□ 17
MCF2L-203ENST00000375604 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 CRISPLD1Q9H336 500 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 SLC27A6Q9Y2P4 619 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ARL5AQ9Y689 179 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ICAM3P32942 547 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ST13P50502 369 aaKnown RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ZBTB2Q8N680 514 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 MOSPD2Q8NHP6 518 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 BTN2A3PQ96KV6 586 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 USP46P62068 366 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 RFX4Q33E94 735 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 TAF8Q7Z7C8 310 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 STARD8Q92502 1023 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 EXOSC8Q96B26 276 aaKnown RBP17.13■□□□□ 0.33
MCF2L-203ENST00000375604 LRRC39Q96DD0 335 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 GPR21Q99679 349 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 PRRG4Q9BZD6 226 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 EPS8L2Q9H6S3 715 aa17.13■□□□□ 0.33
MCF2L-203ENST00000375604 A8MUI8 341 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 TFPIP10646 304 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 NMBRP28336 390 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 YAP1P46937 504 aaKnown RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 CLK3P49761 638 aaKnown RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 DUPD1Q68J44 220 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 CUZD1Q86UP6 607 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 TRIM8Q9BZR9 551 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 MARCH7Q9H992 704 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 FBXW2Q9UKT8 454 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 REXO2Q9Y3B8 237 aaKnown RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 TBX18O95935 607 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 UQCRBP14927 111 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 LAG3P18627 525 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 AKT2P31751 481 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PPM1AP35813 382 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 QPCTQ16769 361 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 ANKRD22Q5VYY1 191 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PPP2R2DQ66LE6 453 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms