RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 USP46P62068 366 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 HERVK_113P63132 956 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 TRAP1Q12931 704 aaKnown RBP12.23□□□□□ -0.45
UBR4-203ENST00000375225 FASTKQ14296 549 aaKnown RBP12.23□□□□□ -0.45
UBR4-203ENST00000375225 ZNF423Q2M1K9 1284 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 GRAMD1BQ3KR37 738 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 ZNF678Q5SXM1 525 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 OGFRL1Q5TC84 451 aaPredicted RBP12.23□□□□□ -0.45
UBR4-203ENST00000375225 KIAA1841Q6NSI8 718 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 KLHDC10Q6PID8 442 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 C7orf61Q8IZ16 206 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 LGI2Q8N0V4 545 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 PELI3Q8N2H9 469 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 ATAD1Q8NBU5 361 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 HIPK4Q8NE63 616 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 ADCY4Q8NFM4 1077 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 BADQ92934 168 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 MGME1Q9BQP7 344 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 ERVK-6Q9BXR3 956 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 TRIM15Q9C019 465 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 CYP4F12Q9HCS2 524 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 TAS2R13Q9NYV9 303 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 COMMD10Q9Y6G5 202 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
UBR4-203ENST00000375225 SLC38A8A6NNN8 435 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 LDB2O43679 373 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 NDUFS3O75489 264 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 SKAP2O75563 359 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 BCAS2O75934 225 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 SRP72O76094 671 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 GOT2P00505 430 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 LYNP07948 512 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 ZDHHC11BP0C7U3 371 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 ALDH1A3P47895 512 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 GNA12Q03113 381 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 RAD51Q06609 339 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 GEN1Q17RS7 908 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 SPATS1Q496A3 300 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 SAMD4BQ5PRF9 694 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 CHST9Q7L1S5 443 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 TMEM173Q86WV6 379 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 KBTBD2Q8IY47 623 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 SPATA6LQ8N4H0 392 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 NKAPQ8N5F7 415 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 STAG3L4Q8TBR4 150 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 BCL7CQ8WUZ0 217 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 ROPN1LQ96C74 230 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 ASB9Q96DX5 294 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 PHF21BQ96EK2 531 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 TMA16Q96EY4 203 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 TSC22D3Q99576 134 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 LBHD1Q9BQE6 289 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 AARSD1Q9BTE6 412 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 TTLL2Q9BWV7 592 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 ADGRE3Q9BY15 652 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 ALG9Q9H6U8 611 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 NLE1Q9NVX2 485 aaPredicted RBP12.22□□□□□ -0.45
UBR4-203ENST00000375225 ADA2Q9NZK5 511 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 NDUFA13Q9P0J0 144 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 RAB26Q9ULW5 256 aa12.22□□□□□ -0.45
UBR4-203ENST00000375225 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 GIPC1O14908 333 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 KDELR3O43731 214 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 CRCPO75575 148 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 WISP3O95389 354 aaPredicted RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 CHEK2O96017 543 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SLC4A1P02730 911 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SOD2P04179 222 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 FGF4P08620 206 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBR4-203ENST00000375225 CD1DP15813 335 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 CDC25CP30307 473 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 STC1P52823 247 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 PSME3P61289 254 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 ZNF177Q13360 481 aaPredicted RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 TAF1AQ15573 450 aaPredicted RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 GPR158Q5T848 1215 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 UGT3A1Q6NUS8 523 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 ZNF783Q6ZMS7 281 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SLC39A11Q8N1S5 342 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 UCMAQ8WVF2 138 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 USP13Q92995 863 aaPredicted RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 C19orf60Q96EN9 201 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 B3GALT6Q96L58 329 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 TBATAQ96M53 351 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 PSKH2Q96QS6 385 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 HERC2P3Q9BVR0 1158 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 GSTO2Q9H4Y5 243 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 PDFQ9HBH1 243 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms