RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CAMKK1Q8N5S9 505 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 COX4I2Q96KJ9 171 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SPATA5L1Q9BVQ7 753 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 C8orf4Q9NR00 106 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 OR12D3Q9UGF7 316 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 hCG_1818297A0A087WSY0 165 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PSMD11O00231 422 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC28A1O00337 649 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 IDO1P14902 403 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SELPP16109 830 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 CAPGP40121 348 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 JAM2P57087 298 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 USP41Q3LFD5 358 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 FNBP1LQ5T0N5 605 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 UBE2E3Q969T4 207 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 FAXDC2Q96IV6 333 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SNRNP25Q9BV90 132 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 RACGAP1Q9H0H5 632 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 S100A14Q9HCY8 104 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ARL8BQ9NVJ2 186 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 GSC2O15499 205 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PCDH8O95206 1070 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 MMP8P22894 467 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 RPL38P63173 70 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC24A5Q71RS6 500 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 MCFD2Q8NI22 146 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PCDHB18PQ96TA0 734 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 OMDQ99983 421 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF670Q9BS34 389 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.449e-8■■□□□ 13.3
NPLOC4-202ENST00000374747 XPR1Q9UBH6 696 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 DKK3Q9UBP4 350 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PADI3Q9ULW8 664 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF232Q9UNY5 417 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 TCRBV9S1A1TA0A576 114 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 LGR5O75473 907 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MYL9P24844 172 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC7A2P52569 658 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 UGT2B15P54855 530 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 PPM1LQ5SGD2 360 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 GPRIN3Q6ZVF9 776 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 CXXC5Q7LFL8 322 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SLCO6A1Q86UG4 719 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ZC3H7AQ8IWR0 971 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 IQCKQ8N0W5 287 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 C1orf127Q8N9H9 656 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SNX15Q9NRS6 342 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 GNPTGQ9UJJ9 305 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 BTRCQ9Y297 605 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 A0A088AWK7 358 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 NUDT14O95848 222 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF10P21506 573 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MATKP42679 507 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 STARP49675 285 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 HNMTP50135 292 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 RPL7AP62424 266 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MRPS5P82675 430 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 BIKQ13323 160 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ATP13A4Q4VNC1 1196 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 TBC1D21Q8IYX1 336 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 DAW1Q8N136 415 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM84AQ96KN4 292 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 KLHL32Q96NJ5 620 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MAGEL2Q9UJ55 1249 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 CENPFP49454 3210 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MGRN1O60291 552 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 BCAP31P51572 246 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ARHGAP1Q07960 439 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 NEK5Q6P3R8 708 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ATL1Q8WXF7 558 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SEZ6LQ9BYH1 1024 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 SMPD4Q9NXE4 827 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 TRAFD1O14545 582 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 AZIN1O14977 448 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 PMM2O15305 246 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 NELFEP18615 380 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 OLR1P78380 273 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ACOX1Q15067 660 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 INSCQ1MX18 579 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 LPCAT4Q643R3 524 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms