RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CLCA4Q14CN2 919 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 CLPPQ16740 277 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 SLC30A9Q6PML9 568 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 RBM43Q6ZSC3 357 aaKnown RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 IRF2BP2Q7Z5L9 587 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 DTD2Q96FN9 168 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 AKAP7Q9P0M2 348 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 STMND1H3BQB6 276 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PRPSAP2O60256 369 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 SFTPCP11686 197 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 VIPR1P32241 457 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 GPR3P46089 330 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 POLD2P49005 469 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 HCAR3P49019 387 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 CTBSQ01459 385 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 MYL5Q02045 173 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PTPRRQ15256 657 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 DENND2CQ68D51 928 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 HSD11B1LQ7Z5J1 315 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PSTKQ8IV42 348 aaKnown RBP13.77□□□□□ -0.21
CXCL12-202ENST00000374426 NAGSQ8N159 534 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PGBD5Q8N414 524 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PDCD6IPQ8WUM4 868 aaKnown RBP13.77□□□□□ -0.21
CXCL12-202ENST00000374426 CCDC74BQ96LY2 380 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF599Q96NL3 588 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 SLC12A9Q9BXP2 914 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 SLC17A4Q9Y2C5 497 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 DOPEY2Q9Y3R5 2298 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 PCDHGA3Q9Y5H0 932 aa13.77□□□□□ -0.21
CXCL12-202ENST00000374426 A0A1W2PQ67 120 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-202ENST00000374426 PPM1DO15297 605 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 LRCH4O75427 683 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 RNF8O76064 485 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 CPP00450 1065 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 CCDC172P0C7W6 258 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 CSF2RBP32927 897 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 ADCY8P40145 1251 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 LIMK2P53671 638 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 TRAF2Q12933 501 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF235Q14590 738 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 NKAIN2Q5VXU1 208 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 Q6ZVL8 140 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 OR4D9Q8NGE8 314 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 FNIP1Q8TF40 1166 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 NKD1Q969G9 470 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 TAAR9Q96RI9 348 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 MGME1Q9BQP7 344 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 LMBRD1Q9NUN5 540 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 ETNK2Q9NVF9 386 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 GEMIN8Q9NWZ8 242 aaKnown RBP13.76□□□□□ -0.21
CXCL12-202ENST00000374426 KCTD5Q9NXV2 234 aa13.76□□□□□ -0.21
CXCL12-202ENST00000374426 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 A0A0U1RQS6 177 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 GOLGA6CA6NDK9 693 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 PSMD11O00231 422 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 ZW10O43264 779 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 MAFKO60675 156 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 SOD1P00441 154 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 IVLP07476 585 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 GOLGA6DP0CG33 693 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 THRAP10827 490 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 MPSTP25325 297 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 IL1R2P27930 398 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 TEAD1P28347 426 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 UGT1A3P35503 534 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 HSPA9P38646 679 aaKnown RBP13.75□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-202ENST00000374426 BIRC2Q13490 618 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 SQSTM1Q13501 440 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 TRA2AQ13595 282 aaKnown RBP eCLIP13.75□□□□□ -0.21
CXCL12-202ENST00000374426 NCAPHQ15003 741 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 RAET1GQ6H3X3 334 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 TECPR1Q7Z6L1 1165 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 TSPAN33Q86UF1 283 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 AGBL5Q8NDL9 886 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 ART4Q93070 314 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 SCRN2Q96FV2 425 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 SCARF2Q96GP6 870 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-202ENST00000374426 MCCC1Q96RQ3 725 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-202ENST00000374426 SLC25A18Q9H1K4 315 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 ZWILCHQ9H900 591 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 GOLGA6AQ9NYA3 693 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 TMEM9Q9P0T7 183 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 PHTF1Q9UMS5 762 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 PLEKHM1Q9Y4G2 1056 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms