RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 NME5P56597 212 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 LPCAT4Q643R3 524 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 PSAPL1Q6NUJ1 521 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ARL14EPQ8N8R7 260 aaPredicted RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 KYQ8NBH2 561 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 PPFIBP2Q8ND30 876 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF599Q96NL3 588 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 KCNA7Q96RP8 456 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 SLC30A3Q99726 388 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 TM6SF2Q9BZW4 377 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 CXorf56Q9H5V9 222 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ZBTB26Q9HCK0 441 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 CHD7Q9P2D1 2997 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 A0A1B0GVM2 712 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 TCAF2A6NFQ2 919 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 SLCO1B7G3V0H7 640 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 TMCC1O94876 653 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 PRAMEF12O95522 483 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 EPOP01588 193 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 CR2P20023 1033 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 THOP1P52888 689 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 TRAF2Q12933 501 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 UNC50Q53HI1 259 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF678Q5SXM1 525 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 IZUMO2Q6UXV1 221 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 DNAJB7Q7Z6W7 309 aaPredicted RBP15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 SDCCAG8Q86SQ7 713 aaPredicted RBP15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 OR9I1Q8NGQ6 314 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 MICAL1Q8TDZ2 1067 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 CDK5RAP1Q96SZ6 601 aaKnown RBP15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 CFHR5Q9BXR6 569 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF334Q9HCZ1 680 aaPredicted RBP15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 CCDC167Q9P0B6 97 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 MICAL3Q7RTP6 2002 aa15.96■□□□□ 0.15
CNKSR1-202ENST00000374253 A0A1B0GTL3 188 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 GOLGA8CPA6NN73 597 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 SRP72O76094 671 aaKnown RBP15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 CTPS1P17812 591 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 PRDX6P30041 224 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 MTTPP55157 894 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 FOXA1P55317 472 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 DEFB103AP81534 67 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 TMEM150AQ86TG1 271 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 PCDH20Q8N6Y1 951 aaKnown RBP15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 CEP70Q8NHQ1 597 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 HMGCLL1Q8TB92 370 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 ESAMQ96AP7 390 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 PLD4Q96BZ4 506 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 TMEM169Q96HH4 297 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 SLC45A3Q96JT2 553 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 C3orf30Q96M34 536 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 KLF16Q9BXK1 252 aaPredicted RBP15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 VPS28Q9UK41 221 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 ADAMTS6Q9UKP5 1117 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 MED16Q9Y2X0 877 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 TRAF6Q9Y4K3 522 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 BACE2Q9Y5Z0 518 aa15.96■□□□□ 0.14
CNKSR1-202ENST00000374253 MYO7AQ13402 2215 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ILVBLA1L0T0 632 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 TRPC5OSA6NMA1 111 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ABLIM3O94929 683 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CRTAMO95727 393 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 EFEMP2O95967 443 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 GNRH1P01148 92 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CXCL10P02778 98 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 IMPDH1P20839 514 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 GKP32189 559 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ALG1LQ6GMV1 187 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 RP9Q8TA86 221 aaKnown RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 DIS3LQ8TF46 1054 aaKnown RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 VWCEQ96DN2 955 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 GPR21Q99679 349 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 AARSD1Q9BTE6 412 aaKnown RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CCDC28BQ9BUN5 200 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 SARS2Q9NP81 518 aaKnown RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 NLE1Q9NVX2 485 aaPredicted RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 IQCF5A8MTL0 148 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 C9JVG2 144 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CDC7O00311 574 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 NIPSNAP2O75323 286 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 NDUFS3O75489 264 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 SOD2P04179 222 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 GFAPP14136 432 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 RAG1P15918 1043 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ACADSP16219 412 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 XRCC1P18887 633 aaPredicted RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 SH3BP2P78314 561 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ART3Q13508 389 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 IKBKEQ14164 716 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 PTPRNQ16849 979 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 SETMARQ53H47 684 aaPredicted RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 ZRANB3Q5FWF4 1079 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CYHR1Q6ZMK1 362 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CPSF7Q8N684 471 aaKnown RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 MAB21L3Q8N8X9 362 aa15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 CCDC97Q96F63 343 aaPredicted RBP15.95■□□□□ 0.14
CNKSR1-202ENST00000374253 MAELQ96JY0 434 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms