RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 ZNF181Q2M3W8 571 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 CACHD1Q5VU97 1274 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 GARNL3Q5VVW2 1013 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 HMBOX1Q6NT76 420 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 MZT2BQ6NZ67 158 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 FAM131AQ6UXB0 335 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 FAM131BQ86XD5 332 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 LGALS12Q96DT0 336 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 SPATA13Q96N96 652 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 ZNF556Q9HAH1 456 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 QPCTLQ9NXS2 382 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 PCDHAC2Q9Y5I4 1007 aa11.23□□□□□ -0.61
SYNPO2L-201ENST00000372873 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 FAM95CA0A1B0GW59 222 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 MEN1O00255 615 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 XPNPEP2O43895 674 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PLOD3O60568 738 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CYP2C8P10632 490 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 NAT2P11245 290 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ERCC2P18074 760 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 SNRPD2P62316 118 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 KCNJ11Q14654 390 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CLEC6AQ6EIG7 209 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 TICAM1Q8IUC6 712 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ROPN1LQ96C74 230 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CPB2Q96IY4 423 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PAK1IP1Q9NWT1 392 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CDH7Q9ULB5 785 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 BBIP1A8MTZ0 92 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 S100A9P06702 114 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ANXA6P08133 673 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RACK1P63244 317 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 INAVAQ3KP66 663 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ZC3H12BQ5HYM0 836 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 FAM45BPQ6NSW5 357 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 FNDC5Q8NAU1 212 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PSD4Q8NDX1 1056 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 LGMNQ99538 433 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RBM4BQ9BQ04 359 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 HDHD2Q9H0R4 259 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 SNX7Q9UNH6 387 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 PSMD10O75832 226 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ADORA2BP29275 332 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CD40LGP29965 261 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 GRIK1P39086 918 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CASP3P42574 277 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 LEPRP48357 1165 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 NPY2RP49146 381 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CDH8P55286 799 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RHBDL3P58872 404 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RPS3AP61247 264 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 SEMA3AQ14563 771 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RFX4Q33E94 735 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 C6orf141Q5SZD1 244 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ZYG11AQ6WRX3 759 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 RASSF6Q6ZTQ3 369 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 LDHDQ86WU2 507 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ZFPM1Q8IX07 1006 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 LGI2Q8N0V4 545 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 FSTL5Q8N475 847 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 FAM109AQ8N4B1 249 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 STON2Q8WXE9 905 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 DDX1Q92499 740 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 NARS2Q96I59 477 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 CGRRF1Q99675 332 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 MMP27Q9H306 513 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 SARS2Q9NP81 518 aaKnown RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 OXSMQ9NWU1 459 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ACTR3BQ9P1U1 418 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 TCAF1Q9Y4C2 921 aa11.22□□□□□ -0.61
SYNPO2L-201ENST00000372873 UPK1BO75841 260 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 OR2B3O76000 313 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 PTTG1O95997 202 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 IL7P13232 177 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 LIMK2P53671 638 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 TPI1P60174 286 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 SRP54P61011 504 aaKnown RBP11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 MED22Q15528 200 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 STYK1Q6J9G0 422 aa11.21□□□□□ -0.61
SYNPO2L-201ENST00000372873 RASAL3Q86YV0 1011 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms