RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 GOLGA6DP0CG33 693 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 LHCGRP22888 699 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 GPR1P46091 355 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 TAS2R40P59535 323 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CDK3Q00526 305 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CLPPQ16740 277 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 C14orf28Q4W4Y0 310 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 Q6ZVL8 140 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 HSD11B1LQ7Z5J1 315 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CCHCR1Q8TD31 782 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 GPBAR1Q8TDU6 330 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CCDC74AQ96AQ1 378 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 AP2M1Q96CW1 435 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 LIN37Q96GY3 246 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 SLC46A1Q96NT5 459 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 LGR4Q9BXB1 951 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 PACSIN1Q9BY11 444 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CDH19Q9H159 772 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CARS2Q9HA77 564 aaKnown RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 LUC7LQ9NQ29 371 aaKnown RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 GOLGA6AQ9NYA3 693 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 SATB2Q9UPW6 733 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 LRRD1A4D1F6 860 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 RGSL1A5PLK6 1076 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 CAPN8A6NHC0 703 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 IVLP07476 585 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 PPIDQ08752 370 aaKnown RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 PDK1Q15118 436 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 TCEAL1Q15170 157 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 C3orf38Q5JPI3 329 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 CERCAMQ5T4B2 595 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 LRRC66Q68CR7 880 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 ADAMTSL4Q6UY14 1074 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 TECPR1Q7Z6L1 1165 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 RHOT1Q8IXI2 618 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 PQLC3Q8N755 202 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 EXD1Q8NHP7 514 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 ATXN7L3BQ96GX2 97 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 HIC2Q96JB3 615 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 UBL7Q96S82 380 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 LYSMD1Q96S90 227 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 FRMD8Q9BZ67 464 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 TMEM168Q9H0V1 697 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 LRRN3Q9H3W5 708 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 PCDH9Q9HC56 1237 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 MRPL40Q9NQ50 206 aaKnown RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 DTLQ9NZJ0 730 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 RALYQ9UKM9 306 aaKnown RBP18.85■□□□□ 0.61
TMEM53-201ENST00000372235 SLC17A4Q9Y2C5 497 aa18.85■□□□□ 0.61
TMEM53-201ENST00000372235 PKD1L2Q7Z442 2459 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 APOL1O14791 398 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 RPLP0P05388 317 aaKnown RBP18.84■□□□□ 0.61
TMEM53-201ENST00000372235 CEACAM5P06731 702 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 PDHA1P08559 390 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 CTPS1P17812 591 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 IFI35P80217 286 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-201ENST00000372235 GBE1Q04446 702 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 BIRC2Q13490 618 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 LRP8Q14114 963 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 SLC9A4Q6AI14 798 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 CRTC1Q6UUV9 634 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 CCNJLQ8IV13 435 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 LSM14AQ8ND56 463 aaKnown RBP18.84■□□□□ 0.61
TMEM53-201ENST00000372235 KCNE4Q8WWG9 221 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 RAD18Q9NS91 495 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 LRIT1Q9P2V4 623 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 APC2O95996 2303 aa18.84■□□□□ 0.61
TMEM53-201ENST00000372235 ZZEF1O43149 2961 aa18.83■□□□□ 0.61
TMEM53-201ENST00000372235 LRP4O75096 1905 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 TEX51A0A1B0GUA7 166 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 D6RAR5 112 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 ITGA2BP08514 1039 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 CCKBRP32239 447 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 NR2C2P49116 596 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 INHBCP55103 352 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 DSC2Q02487 901 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 PTSQ03393 145 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 CCDC173Q0VFZ6 552 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 HLTFQ14527 1009 aaKnown RBP eCLIP18.83■□□□□ 0.6
TMEM53-201ENST00000372235 ARRDC2Q8TBH0 407 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 RAPGEF5Q92565 580 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 CHP1Q99653 195 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 MLPHQ9BV36 600 aaPredicted RBP18.83■□□□□ 0.6
TMEM53-201ENST00000372235 PRORYQ9H606 182 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 ASCL3Q9NQ33 180 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 PKD2L2Q9NZM6 624 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 AKAP7Q9P0M2 348 aaPredicted RBP18.83■□□□□ 0.6
TMEM53-201ENST00000372235 CHKBQ9Y259 395 aa18.83■□□□□ 0.6
TMEM53-201ENST00000372235 ANKRD11Q6UB99 2663 aaPredicted RBP18.83■□□□□ 0.6
TMEM53-201ENST00000372235 RHPN2P1A8MT19 583 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 B4DGG1 531 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 ANKRD66B4E2M5 251 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 TK2O00142 265 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 NOBOXO60393 691 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 JCHAINP01591 159 aa18.82■□□□□ 0.6
TMEM53-201ENST00000372235 HLA-DQB2P05538 268 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms