RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SLC13A1Q9BZW2 595 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 COQ10BQ9H8M1 238 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 TAS2R7Q9NYW3 318 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 NPAP1Q9NZP6 1156 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RNF181Q9P0P0 153 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 AGTPBP1Q9UPW5 1226 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PTPRFP10586 1907 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 DNAJC25-GNG10A0A024R161 153 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 A0A0X1KG70 313 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MAGEB16A2A368 324 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ISPDA4D126 451 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 NOP56O00567 594 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PI15O43692 258 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LPXNO60711 386 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CCNKO75909 580 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PROSCO94903 275 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ASS1P00966 412 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ATF7P17544 494 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 RAD23AP54725 363 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MAMLD1Q13495 774 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TRPC3Q13507 836 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LLGL1Q15334 1064 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 NRF1Q16656 503 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 GNASQ5JWF2 1037 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 COL13A1Q5TAT6 717 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LIN9Q5TKA1 542 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TTC33Q6PID6 262 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MOB2Q70IA6 237 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 RNF149Q8NC42 400 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LEMD2Q8NC56 503 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 INTS12Q96CB8 462 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CMTM5Q96DZ9 223 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TMEM80Q96HE8 168 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 HEXIM2Q96MH2 286 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ZSCAN5AQ9BUG6 496 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CHID1Q9BWS9 393 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 HEMGNQ9BXL5 484 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ADNPQ9H2P0 1102 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TRIM39Q9HCM9 518 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ADPRHL2Q9NX46 363 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 IPO11Q9UI26 975 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 OGTO15294 1046 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 HTRA2O43464 458 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SLITRK5O94991 958 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MFN2O95140 757 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PRKCBP05771 671 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PCNAP12004 261 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 GFAPP14136 432 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 IMPDH1P20839 514 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MYF6P23409 242 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MRPS15P82914 257 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SLC18A2Q05940 514 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PTP4A2Q12974 167 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 KCTD2Q14681 263 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PCM1Q15154 2024 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CARTPTQ16568 116 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PLA2G4EQ3MJ16 856 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TEX44Q53QW1 395 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ESCO2Q56NI9 601 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 YIF1BQ5BJH7 314 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ARSJQ5FYB0 599 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 FSCBQ5H9T9 825 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 NHSL2Q5HYW2 709 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LDLRAP1Q5SW96 308 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 CORO6Q6QEF8 472 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SNX29P2Q8IUI4 249 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ZBTB8OSQ8IWT0 167 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 ZNF786Q8N393 782 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 APPL2Q8NEU8 664 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 OR6F1Q8NGZ6 308 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TFB1MQ8WVM0 346 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 PIK3R3Q92569 461 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TFAP2CQ92754 450 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SPATA33Q96N06 139 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SERPINI1Q99574 410 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 IL12RB2Q99665 862 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 GDF15Q99988 308 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 MRPL47Q9HD33 250 aaKnown RBP8.86□□□□□ -0.99
ATG4A-203ENST00000372232 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 TCAF1Q9Y4C2 921 aa8.86□□□□□ -0.99
ATG4A-203ENST00000372232 SIP14410 1827 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PI4K2BG5E9Z4 385 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 KHNYNO15037 678 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MMP20O60882 483 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 OR7A10O76100 309 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 KCNK2O95069 426 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 JUNBP17275 347 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MATN1P21941 496 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 RPL10P27635 214 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 TALDO1P37837 337 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MYL6P60660 151 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 BST1Q10588 318 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 BST2Q10589 180 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms