RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 GPR150Q8NGU9 434 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 PLEKHO2Q8TD55 490 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 DNAJA4Q8WW22 397 aaPredicted RBP10.02□□□□□ -0.81
SCNM1-202ENST00000368905 OR1F2PQ96R84 312 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 CDRT15Q96T59 188 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 AGAP2Q99490 1192 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SLC29A1Q99808 456 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 TBC1D10AQ9BXI6 508 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 KLHL4Q9C0H6 718 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 GOLPH3Q9H4A6 298 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 CNGB3Q9NQW8 809 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 NOCTQ9UK39 431 aaKnown RBP10.02□□□□□ -0.81
SCNM1-202ENST00000368905 TMPRSS11EQ9UL52 423 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ALG6Q9Y672 507 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 OR6C75A6NL08 312 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 KIAA0355O15063 1070 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CYP26A1O43174 497 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 PCDH8O95206 1070 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 SPDEFO95238 335 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 PIGRP01833 764 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 LIPFP07098 398 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 UMPSP11172 480 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 HOXD8P13378 290 aaPredicted RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CYP11B1P15538 503 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 RHOQP17081 205 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 ARL3P36405 182 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 MDH1P40925 334 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CD97P48960 835 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 POLD3Q15054 466 aaPredicted RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 FAM98BQ52LJ0 330 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 EXOSC6Q5RKV6 272 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CEP85LQ5SZL2 805 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 TRMT10CQ7L0Y3 403 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 NUDT13Q86X67 352 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CCDC60Q8IWA6 550 aaPredicted RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 ZNF679Q8IYX0 411 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 POU5F2Q8N7G0 328 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 ICA1LQ8NDH6 482 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 FANK1Q8TC84 345 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 LIPHQ8WWY8 451 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 SEC14L1Q92503 715 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 KREMEN1Q96MU8 473 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 GPR63Q9BZJ6 419 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 DDX47Q9H0S4 455 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 PCED1AQ9H1Q7 454 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 PALMDQ9NP74 551 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CENPMQ9NSP4 180 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 FAM120CQ9NX05 1096 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 TAS2R14Q9NYV8 317 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 CSADQ9Y600 493 aa10.01□□□□□ -0.81
SCNM1-202ENST00000368905 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.01□□□□□ -0.81
SCNM1-202ENST00000368905 TMEM210A6NLX4 147 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 SHOXO15266 292 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 AKR7A3O95154 331 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 METTL18O95568 372 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ALDH2P05091 517 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ESRRAP11474 423 aaPredicted RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 PCSK2P16519 638 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 CRABP2P29373 138 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 LRPAP1P30533 357 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 SLC5A2P31639 672 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 CHRNA3P32297 505 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 PTGIRP43119 386 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ALDH7A1P49419 539 aaKnown RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 SEC24CP53992 1094 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 P2RX3P56373 397 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ERVK-9P63128 1117 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 LACTBP83111 547 aaPredicted RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 KLC1Q07866 573 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 CLN3Q13286 438 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 TBCEQ15813 527 aaPredicted RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 SPATS1Q496A3 300 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 CHSY3Q70JA7 882 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 CPLX4Q7Z7G2 160 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 SCN4BQ8IWT1 228 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 TDRD5Q8NAT2 981 aaKnown RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10□□□□□ -0.812e-15■■□□□ 11.8
SCNM1-202ENST00000368905 PUM2Q8TB72 1066 aaKnown RBP eCLIP10□□□□□ -0.81
SCNM1-202ENST00000368905 ZNF564Q8TBZ8 553 aaPredicted RBP10□□□□□ -0.81
SCNM1-202ENST00000368905 MUL1Q969V5 352 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 C1GALT1C1Q96EU7 318 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 PGM2Q96G03 612 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ZIM3Q96PE6 472 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 MIPEPQ99797 713 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ZSWIM1Q9BR11 485 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 FAM213AQ9BRX8 229 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 BTBD1Q9H0C5 482 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 GBA3Q9H227 469 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 PORCNQ9H237 461 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 C11orf16Q9NQ32 467 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 XPNPEP1Q9NQW7 623 aa10□□□□□ -0.81
SCNM1-202ENST00000368905 ERVK-11Q9UQG0 969 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms