RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 LILRA4P59901 499 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 AMIGO2Q86SJ2 522 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ZFP28Q8NHY6 868 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 HBEGFQ99075 208 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 EPB41L4BQ9H329 900 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 KCNE2Q9Y6J6 123 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 SMIM31A0A1B0GVY4 71 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 SLC31A1O15431 190 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 LRCH4O75427 683 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 RPP40O75818 363 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 FSBPO95073 299 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 GJA1P17302 382 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 SSR2P43308 183 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 TRIQKQ629K1 86 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 BRINP2Q9C0B6 783 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 APOBEC3GQ9HC16 384 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 LEF1Q9UJU2 399 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ABHD14A-ACY1A0A1B0GW23 586 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 RFXANKO14593 260 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 LGR5O75473 907 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 UQCRBP14927 111 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ITPKBP27987 946 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ERVK-21P61565 698 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ATP6V1C2Q8NEY4 427 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 OR52L1Q8NGH7 329 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 COQ6Q9Y2Z9 468 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 CARNS1A5YM72 827 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 BCL10O95999 233 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 VSTM1Q6UX27 236 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 IRF2BP1Q8IU81 584 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 TBATAQ96M53 351 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 GPR21Q99679 349 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 HMGXB4Q9UGU5 601 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 U3KQV3 271 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 A0A1W2PQ67 120 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 OR10H3O60404 316 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 TBX18O95935 607 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 CUZD1Q86UP6 607 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ZBTB46Q86UZ6 589 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 GPR180Q86V85 440 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PPCDCQ96CD2 204 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 S100A13Q99584 98 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 MYRFQ9Y2G1 1151 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 SLC38A8A6NNN8 435 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 BTNL10A8MVZ5 291 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 H3BM21 787 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 NOL4O94818 638 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 TIGD2Q4W5G0 525 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 RNASEH2BQ5TBB1 312 aaKnown RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 BTN2A1Q7KYR7 527 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PSMG2Q969U7 264 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 APOLD1Q96LR9 279 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 EPS8L2Q9H6S3 715 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ELL3Q9HB65 397 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ARHGEF3Q9NR81 526 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 DAPK2Q9UIK4 370 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 CNOT6Q9ULM6 557 aaKnown RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 MYO5BQ9ULV0 1848 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 URADA6NGE7 173 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PSMD11O00231 422 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 C8AP07357 584 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 NRLP54845 237 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.357e-7■□□□□ 9.8
PTPRK-207ENST00000368226 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 NAPRTQ6XQN6 538 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 NRSN1Q8IZ57 195 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ZBTB2Q8N680 514 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 SPAG4Q9NPE6 437 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 TPRKBQ9Y3C4 175 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 RAP2CQ9Y3L5 183 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 LRIG2O94898 1065 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms