RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ANKDD1BA6NHY2 528 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 STX11O75558 287 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 TNFP01375 233 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 SLC10A3P09131 477 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 GPD1P21695 349 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 NTSP30990 170 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 RRM2P31350 389 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PIK3CGP48736 1102 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 CASP4P49662 377 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 SCNN1GP51170 649 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 BST2Q10589 180 aaKnown RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 C5orf22Q49AR2 442 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 C1QTNF12Q5T7M4 302 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PRMT9Q6P2P2 845 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 TTC27Q6P3X3 843 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 CYP20A1Q6UW02 462 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 VITQ6UXI7 678 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 COMMD2Q86X83 199 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 ARL14Q8N4G2 192 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 BRSK1Q8TDC3 778 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 NXPE3Q969Y0 559 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 KAZALD1Q96I82 304 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 AIFM3Q96NN9 605 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PI4K2AQ9BTU6 479 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 CDH19Q9H159 772 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 LRRC10BA6NIK2 292 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 GTPBP1O00178 669 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CNTN5O94779 1100 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 FTH1P02794 183 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CDC25AP30304 524 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 SPRP35270 261 aaPredicted RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CYP4F8P98187 520 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 POU4F1Q01851 419 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 USP10Q14694 798 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CELF3Q5SZQ8 465 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 RESP18Q5W5W9 173 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 GPR139Q6DWJ6 353 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 NIPA1Q7RTP0 329 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 MPP5Q8N3R9 675 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 SRFBP1Q8NEF9 429 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ACER1Q8TDN7 264 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TBC1D13Q9NVG8 400 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 POU2F3Q9UKI9 436 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CDH9Q9ULB4 789 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ROBO1Q9Y6N7 1651 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PTPRJQ12913 1337 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ALAS2P22557 587 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 AMPD1P23109 780 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 WARSP23381 471 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PSMD8P48556 350 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 DGKGP49619 791 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CDH13P55290 713 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 DEFA5Q01523 94 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CHI3L2Q15782 390 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 KLHL26Q53HC5 615 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 MARC1Q5VT66 337 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TYW3Q6IPR3 259 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 RBMS3Q6XE24 437 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ANKS1BQ7Z6G8 1248 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CIR1Q86X95 450 aaPredicted RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 RASAL3Q86YV0 1011 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 STK40Q8N2I9 435 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 SPERTQ8NA61 448 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 COL26A1Q96A83 441 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 KLHDC7BQ96G42 594 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 THUMPD3Q9BV44 507 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 METTL5Q9NRN9 209 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 FBXO28Q9NVF7 368 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 NEU2Q9Y3R4 380 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PMPCBO75439 489 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 HNRNPA1P09651 372 aaKnown RBP eCLIP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 STARP49675 285 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PSMD4P55036 377 aaKnown RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 IL5RAQ01344 420 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TIMM50Q3ZCQ8 353 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 BHLHB9Q6PI77 547 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TMEM156Q8N614 296 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TMIEQ8NEW7 156 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 OR5J2Q8NH18 312 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 BLOC1S5Q8TDH9 187 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 BADQ92934 168 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 SERPINB12Q96P63 405 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 KBTBD4Q9NVX7 518 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 COMMD9Q9P000 198 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TBC1D30Q9Y2I9 924 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 DLG5Q8TDM6 1919 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 E9PBE3 544 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 WRBO00258 174 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 YKT6O15498 198 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CLOCKO15516 846 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ZBTB14O43829 449 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms