RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CAMK1DQ8IU85 385 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 RNF148Q8N7C7 305 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 PHF24Q9UPV7 400 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 PRRC2BQ5JSZ5 2229 aaKnown RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 GRIN2DO15399 1336 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 OR2AG2A6NM03 316 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 SLC7A4O43246 635 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 HNRNPRO43390 633 aaKnown RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 GOT2P00505 430 aaKnown RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 ADH5P11766 374 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 COX7A2P14406 83 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 CARD16Q5EG05 197 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 CYB5D1Q6P9G0 228 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 ZNF621Q6ZSS3 439 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 CEP68Q76N32 757 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 LRRC72A6NJI9 287 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 AGRPO00253 132 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 MSANTD2Q6P1R3 559 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 VITQ6UXI7 678 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 DNAJC9Q8WXX5 260 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 PPP3R2Q96LZ3 170 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 MYLK2Q9H1R3 596 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 BLOC1S6Q9UL45 172 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 BTRCQ9Y297 605 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ATP6AP2A0A1C7CYW4 349 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 AZIN1O14977 448 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ATP6AP2O75787 350 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ALBP02768 609 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 LRRC23Q53EV4 343 aaPredicted RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■□□□□ 9.2
CTR9-201ENST00000361367 ZNF513Q8N8E2 541 aaPredicted RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 CLP1Q92989 425 aaKnown RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 PIWIL1Q96J94 861 aaKnown RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 NSMCE2Q96MF7 247 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 TCF12Q99081 682 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 TRMOQ9BU70 441 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 RHBGQ9H310 441 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 GJD2Q9UKL4 321 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ENTPD4Q9Y227 616 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 SOCS7O14512 581 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 BEST1O76090 585 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 NEK3P51956 506 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 LRRC73Q5JTD7 316 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 RTP2Q5QGT7 225 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 SERPINA9Q86WD7 417 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 CEP19Q96LK0 163 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 NOD2Q9HC29 1040 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 TMCC3Q9ULS5 477 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 GSAPA4D1B5 854 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 C16orf96A6NNT2 1141 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 J3KR12 359 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 SLC31A1O15431 190 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 BPGMP07738 259 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 TRMT5Q32P41 509 aaKnown RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 PLA2G4EQ3MJ16 856 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ATAD3BQ5T9A4 648 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ADGRD1Q6QNK2 874 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 P3H2Q8IVL5 708 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 CLYBLQ8N0X4 340 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 OR10G6Q8NH81 332 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 NXNL1Q96CM4 212 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 H2AFY2Q9P0M6 372 aaPredicted RBP13.85□□□□□ -0.19
CTR9-201ENST00000361367 PLLPQ9Y342 182 aa13.85□□□□□ -0.19
CTR9-201ENST00000361367 C15orf38-AP3S2A0A0A6YYH1 394 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 NPEPPSL1A6NEC2 478 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 HGFP14210 728 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 IDSP22304 550 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 SEMG2Q02383 582 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 TAF1AQ15573 450 aaPredicted RBP13.84□□□□□ -0.19
CTR9-201ENST00000361367 CCDC85BQ15834 202 aaPredicted RBP13.84□□□□□ -0.19
CTR9-201ENST00000361367 EML3Q32P44 896 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 MARCH8Q5T0T0 291 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 ARPINQ7Z6K5 226 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 MRPL10Q7Z7H8 261 aaKnown RBP13.84□□□□□ -0.19
CTR9-201ENST00000361367 ZBTB2Q8N680 514 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 VPS33AQ96AX1 596 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 TMEM237Q96Q45 408 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 ZNF180Q9UJW8 692 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 HNRNPCL2B2RXH8 293 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 PCCBP05166 539 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 CRHR1P34998 444 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 KRT20P35900 424 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 PEX6Q13608 980 aa13.84□□□□□ -0.19
CTR9-201ENST00000361367 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms