RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 GPR180Q86V85 440 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PIM3Q86V86 326 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 ANKRD49Q8WVL7 239 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PSMG2Q969U7 264 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 DRC3Q9H069 523 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 SMOC2Q9H3U7 446 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 CLK4Q9HAZ1 481 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 IL1RL2Q9HB29 575 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 ABCC13Q9NSE7 274 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 SPATA7Q9P0W8 599 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 ACOT9Q9Y305 439 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 CORINQ9Y5Q5 1042 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 NLRC5Q86WI3 1866 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 ALDH3B2P48448 385 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 HSPA13P48723 471 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 RPL14P50914 215 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 RAB10P61026 200 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 TSPY1Q01534 308 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 NR1D2Q14995 579 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PERM1Q5SV97 790 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 RANBP10Q6VN20 620 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 FBXO5Q9UKT4 447 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 AAR2Q9Y312 384 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 SOCS2O14508 198 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PRSS56P0CW18 603 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 CDH3P22223 829 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 OR1G1P47890 313 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 GATMP50440 423 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PMS2P3Q13401 168 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 SLC12A1Q13621 1099 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PDCD4Q53EL6 469 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 CLLU1OSQ5K130 101 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 SEL1L3Q68CR1 1132 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 PHF21BQ96EK2 531 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 SMIM14Q96QK8 99 aa16.2■□□□□ 0.18
IFT140-201ENST00000361339 STN1Q9H668 368 aaKnown RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 MARCH4Q9P2E8 410 aaPredicted RBP16.2■□□□□ 0.18
IFT140-201ENST00000361339 E7ENX8 843 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 STMN1P16949 149 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 KCNC1P48547 511 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 MBTPS1Q14703 1052 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 RTL3Q8N8U3 475 aaKnown RBP16.19■□□□□ 0.18
IFT140-201ENST00000361339 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 VPS50Q96JG6 964 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 SUSD3Q96L08 255 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 RPL10LQ96L21 214 aaKnown RBP16.19■□□□□ 0.18
IFT140-201ENST00000361339 NEURL2Q9BR09 285 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 POMKQ9H5K3 350 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 EFCAB1Q9HAE3 211 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 PNPLA3Q9NST1 481 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 TREX1Q9NSU2 369 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 PRPF19Q9UMS4 504 aaKnown RBP16.19■□□□□ 0.18
IFT140-201ENST00000361339 HDAC3O15379 428 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 HTRA2O43464 458 aaPredicted RBP16.19■□□□□ 0.18
IFT140-201ENST00000361339 ZNF623O75123 536 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 BCAS2O75934 225 aaPredicted RBP16.19■□□□□ 0.18
IFT140-201ENST00000361339 MYL4P12829 197 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 NSUN2Q08J23 767 aaKnown RBP eCLIP16.19■□□□□ 0.18
IFT140-201ENST00000361339 CARTPTQ16568 116 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 PPP1R3AQ16821 1122 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 LINC00523Q86TU6 105 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 PGBD5Q8N414 524 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 LINC01599Q8WXQ3 324 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 CRISPLD1Q9H336 500 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 VPS51Q9UID3 782 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 RAP2CQ9Y3L5 183 aa16.19■□□□□ 0.18
IFT140-201ENST00000361339 BMXP51813 675 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 FBXO48Q5FWF7 155 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 NEPROQ6NW34 567 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 THEM5Q8N1Q8 247 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 GABPB2Q8TAK5 448 aaPredicted RBP16.18■□□□□ 0.18
IFT140-201ENST00000361339 SOCS4Q8WXH5 440 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 SLC45A3Q96JT2 553 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 GTSE1Q9NYZ3 720 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 CCDC167Q9P0B6 97 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 BCAP29Q9UHQ4 241 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 PTPRDP23468 1912 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 RNF103-CHMP3A0A140T963 221 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 TMEM114B3SHH9 223 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 ANXA9O76027 345 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 OXSR1O95747 527 aaPredicted RBP16.18■□□□□ 0.18
IFT140-201ENST00000361339 HOXC13P31276 330 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 MLLT6P55198 1093 aaPredicted RBP16.18■□□□□ 0.18
IFT140-201ENST00000361339 PLCL1Q15111 1095 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 KDELC1Q6UW63 502 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 TMEM207Q6UWW9 146 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 SLC15A4Q8N697 577 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 KDM1BQ8NB78 822 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 BIRC8Q96P09 236 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 CATSPERBQ9H7T0 1116 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 IGSF5Q9NSI5 407 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 CRYL1Q9Y2S2 319 aa16.18■□□□□ 0.18
IFT140-201ENST00000361339 MMP2P08253 660 aa16.17■□□□□ 0.18
IFT140-201ENST00000361339 ACVRL1P37023 503 aa16.17■□□□□ 0.18
IFT140-201ENST00000361339 PPARGP37231 505 aaPredicted RBP16.17■□□□□ 0.18
IFT140-201ENST00000361339 NME5P56597 212 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms