RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FNDC3AQ9Y2H6 1198 aaKnown RBP25.36■■□□□ 1.65
SSBP3-202ENST00000357475 C2orf81A6NN90 581 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 BPIP17213 487 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 SPINT3P49223 89 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 ANGPT1Q15389 498 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 ZNF284Q2VY69 593 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 USP39Q53GS9 565 aaKnown RBP25.35■■□□□ 1.65
SSBP3-202ENST00000357475 TECPR1Q7Z6L1 1165 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 PELI3Q8N2H9 469 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 EIF1ADQ8N9N8 165 aaKnown RBP25.35■■□□□ 1.65
SSBP3-202ENST00000357475 GPR26Q8NDV2 337 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 FOXP3Q9BZS1 431 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 KDM4CQ9H3R0 1056 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 SUDS3Q9H7L9 328 aaPredicted RBP25.35■■□□□ 1.65
SSBP3-202ENST00000357475 TREX1Q9NSU2 369 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 IL1RAPL1Q9NZN1 696 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 SAMD15Q9P1V8 674 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 CUL9Q8IWT3 2517 aa25.35■■□□□ 1.65
SSBP3-202ENST00000357475 CCDC163A0A0D9SF12 145 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 LRRC72A6NJI9 287 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 EIF3HO15372 352 aaKnown RBP eCLIP25.34■■□□□ 1.65
SSBP3-202ENST00000357475 RECQL5O94762 991 aaPredicted RBP25.34■■□□□ 1.65
SSBP3-202ENST00000357475 MAGEA4P43358 317 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 RPS21P63220 83 aaKnown RBP25.34■■□□□ 1.65
SSBP3-202ENST00000357475 ALS2CLQ60I27 953 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 KDM7AQ6ZMT4 941 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 CAPN12Q6ZSI9 719 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 LONP2Q86WA8 852 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 HORMAD1Q86X24 394 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 ZNF669Q96BR6 464 aaPredicted RBP25.34■■□□□ 1.65
SSBP3-202ENST00000357475 EBF2Q9HAK2 575 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 FKBPLQ9UIM3 349 aa25.34■■□□□ 1.65
SSBP3-202ENST00000357475 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.34■■□□□ 1.65
SSBP3-202ENST00000357475 STX7O15400 261 aaKnown RBP25.33■■□□□ 1.65
SSBP3-202ENST00000357475 LZTS3O60299 673 aaPredicted RBP25.33■■□□□ 1.65
SSBP3-202ENST00000357475 IGHV4-34P06331 123 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 SP9P0CG40 484 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 ANKRD20A4Q4UJ75 823 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 KIAA1161Q6NSJ0 714 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 UNC5AQ6ZN44 842 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 UNC5BQ8IZJ1 945 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 SCAMP4Q969E2 229 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 PHACTR1Q9C0D0 580 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 MRM3Q9HC36 420 aaKnown RBP25.33■■□□□ 1.65
SSBP3-202ENST00000357475 NLE1Q9NVX2 485 aaPredicted RBP25.33■■□□□ 1.65
SSBP3-202ENST00000357475 ZC3H7BQ9UGR2 993 aaKnown RBP25.33■■□□□ 1.65
SSBP3-202ENST00000357475 RPS6KL1Q9Y6S9 549 aa25.33■■□□□ 1.65
SSBP3-202ENST00000357475 FAM237BA0A1B0GVD1 139 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PSMD11O00231 422 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 GAPDHSO14556 408 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-202ENST00000357475 RAD51BO15315 384 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 GPR39O43194 453 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 TM7SF2O76062 418 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PAK4O96013 591 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PGAM1P18669 254 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 TMEM135Q86UB9 458 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 STYXQ8WUJ0 223 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PTCD2Q8WV60 388 aaKnown RBP25.32■■□□□ 1.64
SSBP3-202ENST00000357475 NELL1Q92832 810 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 LRRC39Q96DD0 335 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 DTD2Q96FN9 168 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 SPACA7Q96KW9 195 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 TBATAQ96M53 351 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 C1QTNF2Q9BXJ5 285 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 TXLNGYQ9BZA5 131 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 ABCG8Q9H221 673 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 FZD3Q9NPG1 666 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PKP3Q9Y446 797 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 VPS13AQ96RL7 3174 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 THADAQ6YHU6 1953 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PLXNB3Q9ULL4 1909 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 ZCWPW2A0A1B0GU75 182 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 OR51F1A6NGY5 319 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 WNT9AO14904 365 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 FSBPO95073 299 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 ARNTP27540 789 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 CA5AP35218 305 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 GPX6P59796 221 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 CREB5Q02930 508 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 CRYMQ14894 314 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 KIAA0895LQ68EN5 471 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 NEK5Q6P3R8 708 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 TRIM69Q86WT6 500 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PNPLA1Q8N8W4 532 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 AENQ8WTP8 325 aaKnown RBP25.32■■□□□ 1.64
SSBP3-202ENST00000357475 PYROXD1Q8WU10 500 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 BIRC7Q96CA5 298 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 AGAP2Q99490 1192 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 MYOCQ99972 504 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 IL26Q9NPH9 171 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 NINJ2Q9NZG7 142 aa25.32■■□□□ 1.64
SSBP3-202ENST00000357475 MAGEB16A2A368 324 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 K7ESM1 405 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 HRO43593 1189 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 NDUFS2O75306 463 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 PRSS56P0CW18 603 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 PSMA3P25788 255 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 SSTR1P30872 391 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 RPL6Q02878 288 aaKnown RBP25.31■■□□□ 1.64
SSBP3-202ENST00000357475 ACVR1Q04771 509 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms