RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 FDXRP22570 491 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 PSMA4P25789 261 aaKnown RBP12.12□□□□□ -0.47
DDX4-201ENST00000353507 USP46P62068 366 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 SH3BP2P78314 561 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 VPS26BQ4G0F5 336 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 SLC39A12Q504Y0 691 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 IRAK1BP1Q5VVH5 260 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 MRNIPQ6NTE8 343 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 MRPL10Q7Z7H8 261 aaKnown RBP12.12□□□□□ -0.47
DDX4-201ENST00000353507 FAM47BQ8NA70 645 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 TUBGCP3Q96CW5 907 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 ANKRD60Q9BZ19 345 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDX4-201ENST00000353507 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 PTGDR2Q9Y5Y4 395 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 SQORQ9Y6N5 450 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 SOCS2O14508 198 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 CNTN5O94779 1100 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 CDK14O94921 469 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 ITGB1P05556 798 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 HOXB8P17481 243 aaPredicted RBP12.12□□□□□ -0.47
DDX4-201ENST00000353507 IL10P22301 178 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 CD52P31358 61 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 SLC5A2P31639 672 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 PRKCQQ04759 706 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 ALFQ53S48 1182 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 GDF6Q6KF10 455 aaPredicted RBP12.12□□□□□ -0.47
DDX4-201ENST00000353507 PPP4R4Q6NUP7 873 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 LPCAT2Q7L5N7 544 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDX4-201ENST00000353507 ZNF512Q96ME7 567 aaPredicted RBP12.12□□□□□ -0.47
DDX4-201ENST00000353507 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 GID8Q9NWU2 228 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 EGFL7Q9UHF1 273 aa12.12□□□□□ -0.47
DDX4-201ENST00000353507 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 C9JVG2 144 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CD3EAPO15446 510 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 HNRNPRO43390 633 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 LDB2O43679 373 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 TPST1O60507 370 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 GOT2P00505 430 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 BMP2P12643 396 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 PCSK6P29122 969 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ILF2Q12905 390 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 BNIP2Q12982 314 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 UGT3A2Q3SY77 523 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 MS4A13Q5J8X5 152 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 AQP12AQ8IXF9 295 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 DRAXINQ8NBI3 349 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 SH3RF2Q8TEC5 729 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 FATE1Q969F0 183 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 CLK4Q9HAZ1 481 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SUPT3HO75486 399 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 ZNF37AP17032 561 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 LBPP18428 481 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CAPN3P20807 821 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 EFEMP1Q12805 493 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CAPRIN1Q14444 709 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 MSANTD2Q6P1R3 559 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CXCL17Q6UXB2 119 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 MON1AQ86VX9 555 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CAMK1DQ8IU85 385 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SPPL2CQ8IUH8 684 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 CBR4Q8N4T8 237 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ATP6V0D2Q8N8Y2 350 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 HM13Q8TCT9 377 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 UROC1Q96N76 676 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SEMA3CQ99985 751 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 OLAHQ9NV23 265 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 POLR3BQ9NW08 1133 aaPredicted RBP12.11□□□□□ -0.47
DDX4-201ENST00000353507 ABCD2Q9UBJ2 740 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 SLC8A2Q9UPR5 921 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 ARL5AQ9Y689 179 aa12.11□□□□□ -0.47
DDX4-201ENST00000353507 LRRC14BA6NHZ5 514 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms