RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RETREG1Q9H6L5 497 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 LRRC40Q9H9A6 602 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 ACTR5Q9H9F9 607 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 KIF9Q9HAQ2 790 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 NMUR1Q9HB89 426 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CASS4Q9NQ75 786 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 TDP1Q9NUW8 608 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 KLHL8Q9P2G9 620 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 HSFX1Q9UBD0 423 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 PCDHGA1Q9Y5H4 931 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 NYNRINQ9P2P1 1898 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 DOCK4Q8N1I0 1966 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 IGLV3-10A0A075B6K4 115 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 A0A1B0GTL3 188 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 A0A1B0GVT2 93 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 A0A1W2PPM1 405 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 FOXO6A8MYZ6 492 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 MATN3O15232 486 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 KLK10O43240 276 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 IL1BP01584 269 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CSH1P0DML2 217 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CSH2P0DML3 217 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CPB1P15086 417 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 GNSP15586 552 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ATF6P18850 670 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 KRT4P19013 534 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 YWHAQP27348 245 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 RPA3P35244 121 aaPredicted RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 GRK6P43250 576 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 NPY2RP49146 381 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ACADVLP49748 655 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 PCBP4P57723 403 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 RPL10AP62906 217 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 ZBTB17Q13105 803 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 PLD1Q13393 1074 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CRYMQ14894 314 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 LRRC14Q15048 493 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 TRIP4Q15650 581 aaPredicted RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 DBN1Q16643 649 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 KIF19Q2TAC6 998 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 SYCP2LQ5T4T6 812 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 BROXQ5VW32 411 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 TXNDC8Q6A555 127 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 PID1Q7Z2X4 250 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 LINC00523Q86TU6 105 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 PRPF39Q86UA1 669 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 TICAM1Q8IUC6 712 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 TP53INP2Q8IXH6 220 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 C4orf33Q8N1A6 199 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 MPP5Q8N3R9 675 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ATPAF2Q8N5M1 289 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ATP6V0D2Q8N8Y2 350 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 GDAP1Q8TB36 358 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 MGARPQ8TDB4 240 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ACMSDQ8TDX5 336 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CDKL2Q92772 493 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 FBXO32Q969P5 355 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 SLC22A12Q96S37 553 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 VPS11Q9H270 941 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 TLR8Q9NR97 1041 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 SMYD2Q9NRG4 433 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.28□□□□□ -1.08
CD44-205ENST00000352818 OSER1Q9NX31 292 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
CD44-205ENST00000352818 SEPT10Q9P0V9 454 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ASB3Q9Y575 518 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 SNX10Q9Y5X0 201 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 HS3ST4Q9Y661 456 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 MAD1L1Q9Y6D9 718 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
CD44-205ENST00000352818 CEP192Q8TEP8 1941 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 FAM237BA0A1B0GVD1 139 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MAGEB16A2A368 324 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 CXorf49A8MYA2 514 aaPredicted RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 MYO1CO00159 1063 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 KCNK1O00180 336 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 EFSO43281 561 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MSI1O43347 362 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 EDF1O60869 148 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 SPAG7O75391 227 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 USP1O94782 785 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 FSBPO95073 299 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 FGF19O95750 216 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 F11P03951 625 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 POLBP06746 335 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 GSTA1P08263 222 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 RHOQP17081 205 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 NDUFV2P19404 249 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 NFKB1P19838 968 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MGAT1P26572 445 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 FOXN2P32314 431 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms