RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 HEATR4Q86WZ0 1026 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 CBARPQ8N350 705 aaPredicted RBP15.69■□□□□ 0.1
COPE-202ENST00000349893 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 CPA5Q8WXQ8 436 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 CTRCQ99895 268 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 LRRC19Q9H756 370 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 KCTD5Q9NXV2 234 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 VPS4AQ9UN37 437 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 CSMD1Q96PZ7 3565 aa15.69■□□□□ 0.1
COPE-202ENST00000349893 SHANK1Q9Y566 2161 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 GNLYP22749 145 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 MMP8P22894 467 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 F8A1P23610 371 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 ERCC5P28715 1186 aaPredicted RBP15.68■□□□□ 0.1
COPE-202ENST00000349893 ADCY8P40145 1251 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 GNPDA1P46926 289 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 COPB1P53618 953 aaKnown RBP15.68■□□□□ 0.1
COPE-202ENST00000349893 CDK3Q00526 305 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 BIRC2Q13490 618 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 ASB18Q6ZVZ8 466 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 ESX1Q8N693 406 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 JOSD2Q8TAC2 188 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 FAM172AQ8WUF8 416 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 NUS1Q96E22 293 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 ESPL1Q14674 2120 aa15.68■□□□□ 0.1
COPE-202ENST00000349893 OTOGQ6ZRI0 2925 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 FAM170AA1A519 330 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 J3KR12 359 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
COPE-202ENST00000349893 ACOX1Q15067 660 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 TAF3Q5VWG9 929 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 NAA35Q5VZE5 725 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 C16orf46Q6P387 395 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 KDELC2Q7Z4H8 507 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 SLFN11Q7Z7L1 901 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 TICAM1Q8IUC6 712 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 SFRP1Q8N474 314 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 TSEN2Q8NCE0 465 aaKnown RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 OR10G6Q8NH81 332 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 EPS8L1Q8TE68 723 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 NAA15Q9BXJ9 866 aaKnown RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 CATSPERBQ9H7T0 1116 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 APMAPQ9HDC9 416 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 SIDT1Q9NXL6 827 aaKnown RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 B4GALT6Q9UBX8 382 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 RWDD2AQ9UIY3 292 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 MRPS18BQ9Y676 258 aaKnown RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 RPS6KL1Q9Y6S9 549 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 MED13Q9UHV7 2174 aa15.67■□□□□ 0.1
COPE-202ENST00000349893 ZNF106Q9H2Y7 1883 aaKnown RBP15.67■□□□□ 0.1
COPE-202ENST00000349893 BIN1O00499 593 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
COPE-202ENST00000349893 SEMA7AO75326 666 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 RFPL1O75677 317 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 RECKO95980 971 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 CYP1A1P04798 512 aaPredicted RBP15.66■□□□□ 0.1
COPE-202ENST00000349893 MMEP08473 750 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 NDST2P52849 883 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 PMS2P54278 862 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 GSCP56915 257 aaPredicted RBP15.66■□□□□ 0.1
COPE-202ENST00000349893 BCL2L1Q07817 233 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 CNGA3Q16281 694 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 APLFQ8IW19 511 aaPredicted RBP15.66■□□□□ 0.1
COPE-202ENST00000349893 SLC37A2Q8TED4 501 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 DTD2Q96FN9 168 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 NSMCE3Q96MG7 304 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 TLK1Q9UKI8 766 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 POLHQ9Y253 713 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 PCDHB3Q9Y5E6 796 aa15.66■□□□□ 0.1
COPE-202ENST00000349893 DDAH2O95865 285 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 PDGFAP04085 211 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 FURINP09958 794 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 HTR7P34969 479 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 ACTR1BP42025 376 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 POLD2P49005 469 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 AIF1P55008 147 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 ACTR1AP61163 376 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 ZNF677Q86XU0 584 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 EFCAB3Q8N7B9 438 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 CPT1CQ8TCG5 803 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 AHCYL2Q96HN2 611 aaKnown RBP15.65■□□□□ 0.1
COPE-202ENST00000349893 SLC38A3Q99624 504 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 SUDS3Q9H7L9 328 aaPredicted RBP15.65■□□□□ 0.1
COPE-202ENST00000349893 DONSONQ9NYP3 566 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 NOCTQ9UK39 431 aaKnown RBP15.65■□□□□ 0.1
COPE-202ENST00000349893 FHOD1Q9Y613 1164 aa15.65■□□□□ 0.1
COPE-202ENST00000349893 PSMD11O00231 422 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 POLR1CO15160 346 aaPredicted RBP15.64■□□□□ 0.09
COPE-202ENST00000349893 HTRA2O43464 458 aaPredicted RBP15.64■□□□□ 0.09
COPE-202ENST00000349893 PALMO75781 387 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 HEXIM1O94992 359 aaKnown RBP15.64■□□□□ 0.09
COPE-202ENST00000349893 ANKRD34CP0C6C1 535 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 RFC1P35251 1148 aaPredicted RBP15.64■□□□□ 0.09
COPE-202ENST00000349893 AP1S1P61966 158 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 DPTQ07507 201 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
COPE-202ENST00000349893 LRP8Q14114 963 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms