RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TTC9BQ8N6N2 239 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 FAM45AQ8TCE6 357 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 TSPAN17Q96FV3 270 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 ERVK-6Q9BXR3 956 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 TIMM22Q9Y584 194 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 HTTP42858 3142 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 DLGAP1O14490 977 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 CYP11A1P05108 521 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 CDK4P11802 303 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 DIO3P55073 304 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 EFEMP1Q12805 493 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 MS4A13Q5J8X5 152 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 CLYBLQ8N0X4 340 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 TEX37Q96LM6 180 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 OSBPL11Q9BXB4 747 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 SP110Q9HB58 689 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 CMTM6Q9NX76 183 aa18.08■□□□□ 0.49
PTP4A3-202ENST00000349124 CCDC162PA2VCL2 907 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 H3BNH8 94 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 SLC7A4O43246 635 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 SEC24DO94855 1032 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 OXTRP30559 389 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 STX1BP61266 288 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 CREB5Q02930 508 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 MAP7D1Q3KQU3 841 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF683Q8IZ20 524 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 KLHDC9Q8NEP7 349 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 OR2T34Q8NGX1 318 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 OR2T3Q8NH03 318 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 TWIST2Q8WVJ9 160 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 ESAMQ96AP7 390 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 B3GALT6Q96L58 329 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 KATNAL1Q9BW62 490 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 MFSD1Q9H3U5 465 aa18.08■□□□□ 0.48
PTP4A3-202ENST00000349124 TRMUO75648 421 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 MT-ND1P03886 318 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 MTHFD1P11586 935 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 RANBP1P43487 201 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 TSPY1Q01534 308 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 LRRC23Q53EV4 343 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SPRYD7Q5W111 196 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 DDI1Q8WTU0 396 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 PBXIP1Q96AQ6 731 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 VPS33AQ96AX1 596 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 TUBGCP3Q96CW5 907 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 L3HYPDHQ96EM0 354 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 ADAM2Q99965 735 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SEMA3CQ99985 751 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 FAM50BQ9Y247 325 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 M0QZQ0 153 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 FXYD1O00168 92 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 PRDX3P30048 256 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 THPOP40225 353 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 FBXL22Q6P050 247 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 EPHX4Q8IUS5 362 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SCML4Q8N228 414 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 UMODL1-AS1Q8N2C9 162 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 UHRF1Q96T88 793 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 GPATCH1Q9BRR8 931 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 PIF1Q9H611 641 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SEMA4BQ9NPR2 832 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 GMIPQ9P107 970 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 USP22Q9UPT9 525 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 NCF1BA6NI72 391 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 NCF1CA8MVU1 366 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 PYGLP06737 847 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SLC2A3P11169 496 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 HGFP14210 728 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 NCF1P14598 390 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 GALNT1Q10472 559 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 TBCELQ5QJ74 424 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF280BQ86YH2 543 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 PHYKPLQ8IUZ5 450 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 THEM5Q8N1Q8 247 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 FIBCD1Q8N539 461 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 DCBLD1Q8N8Z6 715 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 DNAJB14Q8TBM8 379 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 TOP1MTQ969P6 601 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 MUC3BQ9H195 1237 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 MRPL40Q9NQ50 206 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 SLAMF8Q9P0V8 285 aa18.07■□□□□ 0.48
PTP4A3-202ENST00000349124 CD3EAPO15446 510 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 NCK1P16333 377 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 TBX4P57082 545 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 YWHAHQ04917 246 aaPredicted RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 RABL3Q5HYI8 236 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 BEND5Q7L4P6 421 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 MRPL10Q7Z7H8 261 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 TRPV1Q8NER1 839 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 NUDT8Q8WV74 236 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 SLC39A13Q96H72 371 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 SOX17Q9H6I2 414 aaPredicted RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 PRDM5Q9NQX1 630 aaPredicted RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 SMOXQ9NWM0 555 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 GALPQ9UBC7 116 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 MYRFQ9Y2G1 1151 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 AZIN1O14977 448 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms