RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TCN1P20061 433 aaPredicted RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 ADORA2BP29275 332 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 YAP1P46937 504 aaKnown RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 SURF1Q15526 300 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 NAPRTQ6XQN6 538 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 APOBEC3FQ8IUX4 373 aaKnown RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 GALNT12Q8IXK2 581 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 LRTOMTQ8WZ04 291 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 PIK3R3Q92569 461 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 SLC10A4Q96EP9 437 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 CDRT15Q96T59 188 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 FDXACB1Q9BRP7 624 aaPredicted RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 TIGARQ9NQ88 270 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 TMEM9Q9P0T7 183 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 PSME2Q9UL46 239 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 NUP205Q92621 2012 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 RALBP11234 206 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 TGM2P21980 687 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 GRM1Q13255 1194 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 HERC3Q15034 1050 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 COLGALT1Q8NBJ5 622 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
DFFB-202ENST00000339350 DMRTB1Q96MA1 342 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 MCMBPQ9BTE3 642 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 COG4Q9H9E3 785 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 GBA2Q9HCG7 927 aaPredicted RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 DPP7Q9UHL4 492 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 CNOT11Q9UKZ1 510 aaKnown RBP12.62□□□□□ -0.39
DFFB-202ENST00000339350 SORCS3Q9UPU3 1222 aa12.62□□□□□ -0.39
DFFB-202ENST00000339350 CAPNS1P04632 268 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PSMB4P28070 264 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 HCAR3P49019 387 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 MXD4Q14582 209 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 DUSP7Q16829 419 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 MTX3Q5HYI7 312 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 FAM219BQ5XKK7 198 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 HID1Q8IV36 788 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PDPRQ8NCN5 879 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 RBM14Q96PK6 669 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 KCTD15Q96SI1 283 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 AGAP2Q99490 1192 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 APOL2Q9BQE5 337 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 C1QTNF7Q9BXJ2 289 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 MRPL40Q9NQ50 206 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 IL20Q9NYY1 176 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 ZNF221Q9UK13 617 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 MRPL42Q9Y6G3 142 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 KCNK1O00180 336 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 SLC9A3R1O14745 358 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 CYP2C8P10632 490 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 CKMT2P17540 419 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PROZP22891 400 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 L1CAMP32004 1257 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 CYP2C18P33260 490 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 NUDT2P50583 147 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 CD83Q01151 205 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 MBTD1Q05BQ5 628 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 TNK2Q07912 1038 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 NFE2L1Q14494 772 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 PDK2Q15119 407 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 CDKL3Q8IVW4 592 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 ACVR1CQ8NER5 493 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 IFT22Q9H7X7 185 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 RPRD1BQ9NQG5 326 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 DUS2Q9NX74 493 aaKnown RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 PAQR5Q9NXK6 330 aaPredicted RBP12.61□□□□□ -0.39
DFFB-202ENST00000339350 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
DFFB-202ENST00000339350 A8MUA0 341 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
DFFB-202ENST00000339350 EVPLLA8MZ36 301 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 STX16-NPEPL1H3BU86 382 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 RAD51BO15315 384 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 AKAP10O43572 662 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 GLRA3O75311 464 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 HSPA4LO95757 839 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 CHRNGP07510 517 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 COX4I1P13073 169 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 IFI30P13284 250 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 MAGEA3P43357 314 aa12.6□□□□□ -0.39
DFFB-202ENST00000339350 RABGGTBP53611 331 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms