RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SLC2A3P11169 496 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 RPL17P18621 184 aaKnown RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 GABRB3P28472 473 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 CCR1P32246 355 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 NUDT2P50583 147 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 NDST2P52849 883 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 AQP4P55087 323 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 ACVR1Q04771 509 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 FLOT2Q14254 428 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 DLG2Q15700 870 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 UPP1Q16831 310 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 FAM83EQ2M2I3 478 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 MMEL1Q495T6 779 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 COQ5Q5HYK3 327 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 TSTD2Q5T7W7 516 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 RNF220Q5VTB9 566 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 AGAP9Q5VTM2 703 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 NAIF1Q69YI7 327 aaPredicted RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 FAM45BPQ6NSW5 357 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 KLC3Q6P597 504 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 LILRA6Q6PI73 481 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 ELMSAN1Q6PJG2 1045 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 KDELC1Q6UW63 502 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 SPATA31D4Q6ZUB0 917 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 UMODL1-AS1Q8N2C9 162 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 FAM45AQ8TCE6 357 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 KCTD4Q8WVF5 259 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 TADA1Q96BN2 335 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 ZNF707Q96C28 371 aaPredicted RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 L3HYPDHQ96EM0 354 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 SERPINB11Q96P15 392 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 RTP3Q9BQQ7 232 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 OXCT2Q9BYC2 517 aaPredicted RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 TRIM4Q9C037 500 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 WDR41Q9HAD4 459 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 EPS15L1Q9UBC2 864 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 FBXO5Q9UKT4 447 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 MAGED2Q9UNF1 606 aaPredicted RBP10.81□□□□□ -0.68
RTN3-201ENST00000338850 MYO10Q9HD67 2058 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 WDFY4Q6ZS81 3184 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 C15orf38-AP3S2A0A0A6YYH1 394 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 TCAF2A6NFQ2 919 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 KCNU1A8MYU2 1149 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 ACOT8O14734 319 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 TGM5O43548 720 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 TNFAIP8O95379 198 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 CHRNGP07510 517 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 LTA4HP09960 611 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 UBTFL6P0CB48 400 aaPredicted RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 CPB1P15086 417 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 THOP1P52888 689 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 NAGLUP54802 743 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 CREMQ03060 361 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 ACAP2Q15057 778 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 PDK3Q15120 406 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 RTP2Q5QGT7 225 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 C8orf82Q6P1X6 216 aaPredicted RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 HASPINQ8TF76 798 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 DDI1Q8WTU0 396 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 TSPEARQ8WU66 669 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 SMG7Q92540 1137 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 ROPN1LQ96C74 230 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 DCUN1D1Q96GG9 259 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 UBXN10Q96LJ8 280 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 LRGUKQ96M69 825 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 MUC13Q9H3R2 512 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 MFSD1Q9H3U5 465 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 CAB39LQ9H9S4 337 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 KCNK12Q9HB15 430 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 SLC24A3Q9HC58 644 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 IGSF5Q9NSI5 407 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 TMEM30AQ9NV96 361 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 PIH1D1Q9NWS0 290 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 IPO11Q9UI26 975 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 ZDHHC2Q9UIJ5 367 aa10.8□□□□□ -0.68
RTN3-201ENST00000338850 RUVBL2Q9Y230 463 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 COPG1Q9Y678 874 aaKnown RBP10.8□□□□□ -0.68
RTN3-201ENST00000338850 C2orf16Q68DN1 1984 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SYNJ2BP-COX16A0A087WUM0 186 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 F5H423 210 aaPredicted RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 TMEM189-UBE2V1I3L0A0 370 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TRIM24O15164 1050 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 IPO13O94829 963 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 SMIM18P0DKX4 95 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 PEX19P40855 299 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SLC1A2P43004 574 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 RPL5P46777 297 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 SUOXP51687 545 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 NUBP1P53384 320 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SLC12A2P55011 1212 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TAS2R39P59534 338 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 ART3Q13508 389 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms