RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 C1SP09871 688 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 PYGMP11217 842 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 MYF5P13349 255 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 CKMT2P17540 419 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 ACP1P24666 158 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 HK3P52790 923 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 STC1P52823 247 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 RWDD2BP57060 319 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 GSDMDP57764 484 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 KIAA1024LP59773 190 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 PPARDQ03181 441 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 C1orf61Q13536 156 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 SMAD1Q15797 465 aaKnown RBP15.25■□□□□ 0.03
PRKN-201ENST00000338468 CCDC157Q569K6 752 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 ENPP7Q6UWV6 458 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 DHRS13Q6UX07 377 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 TMPRSS7Q7RTY8 843 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
PRKN-201ENST00000338468 MARCH9Q86YJ5 346 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 FAM181AQ8N9Y4 354 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 SPATA22Q8NHS9 363 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 LMX1AQ8TE12 382 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 BTN2A2Q8WVV5 523 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 OR1E3Q8WZA6 343 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 PDXPQ96GD0 296 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 TBATAQ96M53 351 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 WDR92Q96MX6 357 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 TEX101Q9BY14 249 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 OSBPL8Q9BZF1 889 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 C10orf88Q9H8K7 445 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 FGF22Q9HCT0 170 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
PRKN-201ENST00000338468 EFR3BQ9Y2G0 817 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 CAPN6Q9Y6Q1 641 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 NEMP2A6NFY4 417 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 ANKRD66B4E2M5 251 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
PRKN-201ENST00000338468 FTCDO95954 541 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 MT-CYBP00156 380 aaPredicted RBP15.24■□□□□ 0.03
PRKN-201ENST00000338468 SOD1P00441 154 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 TSHRP16473 764 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 CA4P22748 312 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 NFKBIAP25963 317 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 EPHB1P54762 984 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 CLDN6P56747 220 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 SRP54P61011 504 aaKnown RBP15.24■□□□□ 0.03
PRKN-201ENST00000338468 ARHGEF7Q14155 803 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 GALNT3Q14435 633 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 NOMO1Q15155 1222 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 SLC14A2Q15849 920 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 DEFB133Q30KQ1 61 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 PRRT3Q5FWE3 981 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 FAXCQ5TGI0 409 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 HID1Q8IV36 788 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 ZNF567Q8N184 647 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 EID2BQ96D98 161 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 APOLD1Q96LR9 279 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 WDR24Q96S15 920 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 ABCG8Q9H221 673 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 WDR26Q9H7D7 661 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 MRPL40Q9NQ50 206 aaKnown RBP15.24■□□□□ 0.03
PRKN-201ENST00000338468 SPASTQ9UBP0 616 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 DKK4Q9UBT3 224 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 CD84Q9UIB8 345 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 AMFRQ9UKV5 643 aa15.24■□□□□ 0.03
PRKN-201ENST00000338468 FLNBO75369 2602 aaKnown RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 HELZ2Q9BYK8 2649 aaKnown RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 GOLGA6L6A8MZA4 724 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 HACD1B0YJ81 288 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 LMO7DNF2Z398 122 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 CACNB4O00305 520 aaPredicted RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 TPP1O14773 563 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 YY2O15391 372 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 RFPL3O75679 317 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 CLDN7O95471 211 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 FUCA1P04066 466 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 CKMT1AP12532 417 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 ZNF30P17039 623 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 NFKB1P19838 968 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 HTR1BP28222 390 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 OTUD4Q01804 1114 aaKnown RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 DPTQ07507 201 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 XRCC4Q13426 336 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 KDELC1Q6UW63 502 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 PEX26Q7Z412 305 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 KDELC2Q7Z4H8 507 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 HEATR4Q86WZ0 1026 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 NDUFAF2Q8N183 169 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 OR56A4Q8NGH8 313 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 ACTL9Q8TC94 416 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 SCAMP4Q969E2 229 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 BBC3Q96PG8 261 aaPredicted RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 AGAP2Q99490 1192 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 DUSP23Q9BVJ7 150 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 SLC13A1Q9BZW2 595 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 KCTD5Q9NXV2 234 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 KLQ9UEF7 1012 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 DGKBQ9Y6T7 804 aa15.23■□□□□ 0.03
PRKN-201ENST00000338468 GOLGA4Q13439 2230 aaKnown RBP15.23■□□□□ 0.03
PRKN-201ENST00000338468 TNFRSF10CO14798 259 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms