RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TTC33Q6PID6 262 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RNF19BQ6ZMZ0 732 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJB14Q8TBM8 379 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 INTS10Q9NVR2 710 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 WFS1O76024 890 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CPSF6Q16630 551 aaKnown RBP eCLIP6.29□□□□□ -1.48e-6■□□□□ 9.2
PRKDC-202ENST00000338368 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 SIRPB2Q5JXA9 342 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ELMO1Q92556 727 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CREBZFQ9NS37 354 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ENO4A6NNW6 628 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 FFAR3O14843 346 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GPR42O15529 346 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GLUD1P00367 558 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 OTCP00480 354 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 FGBP02675 491 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GALTP07902 379 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 SQLEQ14534 574 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RFTN1Q14699 578 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ADRM1Q16186 407 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RRM2BQ7LG56 351 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 C14orf80Q86SX3 495 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 SYT12Q8IV01 421 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 IRAK4Q9NWZ3 460 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 FKBPLQ9UIM3 349 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CORO1CQ9ULV4 474 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 KIAA0100Q14667 2235 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PCDH8O95206 1070 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 NEK3P51956 506 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 AP1S1P61966 158 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PKDCCQ504Y2 493 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GRAMD4Q6IC98 578 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 DET1Q7L5Y6 550 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF510Q9Y2H8 683 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PCDHB1Q9Y5F3 818 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TCRBV5S1A1TA0A578 114 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TBC1D3BA6NDS4 549 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 SLC1A2P43004 574 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PFKPQ01813 784 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CLEC6AQ6EIG7 209 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PAQR9Q6ZVX9 377 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 DHDDSQ86SQ9 333 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 UMODL1-AS1Q8N2C9 162 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF461Q8TAF7 563 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MCCC1Q96RQ3 725 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GPR22Q99680 433 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 THG1LQ9NWX6 298 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZNHIT2Q9UHR6 403 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MRPS23Q9Y3D9 190 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 A0A1W2PQ45 241 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 A0A1W2PQY0 241 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ITM2AO43736 263 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 KHDC1Q4VXA5 237 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ADGRF1Q5T601 910 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 PLPP4Q5VZY2 271 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TPGS2Q68CL5 300 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CNTD1Q8N815 330 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 KIF17Q9P2E2 1029 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 LNPEPQ9UIQ6 1025 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZMYND8Q9ULU4 1186 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TBC1D30Q9Y2I9 924 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 COL4A1P02462 1669 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 LDLRP01130 860 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 OCA2Q04671 838 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TSNQ15631 228 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 SPDYE7PQ495Y7 208 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ALFQ53S48 1182 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MSANTD2Q6P1R3 559 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CERS6Q6ZMG9 384 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GPRIN3Q6ZVF9 776 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZMIZ2Q8NF64 920 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 DIS3LQ8TF46 1054 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CXCL16Q9H2A7 254 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 LEF1Q9UJU2 399 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ULK1O75385 1050 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CYP11A1P05108 521 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ADSLP30566 484 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CLCQ05315 142 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TRAF2Q12933 501 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CENPLQ8N0S6 344 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF786Q8N393 782 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NAT16Q8N8M0 369 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FCRL3Q96P31 734 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM175Q9BSA9 504 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 COMMD8Q9NX08 183 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 A0A0J9YYE9 177 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CCDC162PA2VCL2 907 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TOP3BO95985 862 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 DYNC1I2Q13409 638 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PLD4Q96BZ4 506 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 RTP4Q96DX8 246 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FAM32AQ9Y421 112 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 A8MT66 165 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms