RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SYPP08247 313 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 C1SP09871 688 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ZNF806P0C7X5 589 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 CSNK1EP49674 416 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 CLDN2P57739 230 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 YPEL5P62699 121 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 DPTQ07507 201 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 INPP5AQ14642 412 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 PNCKQ6P2M8 343 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 LRRC8BQ6P9F7 803 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 SLC23A3Q6PIS1 610 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 Q6ZSR6 202 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 TP53I13Q8NBR0 393 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 TMEM145Q8NBT3 493 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 MCUQ8NE86 351 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 CPT1BQ92523 772 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 AP2M1Q96CW1 435 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 BMFQ96LC9 184 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ERP44Q9BS26 406 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 RAB17Q9H0T7 212 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ABCG8Q9H221 673 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ANAPC5Q9UJX4 755 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 UTP11Q9Y3A2 253 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 CACNA1HO95180 2353 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 A0A1W2PR77 199 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MAGEB16A2A368 324 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 AURKAO14965 403 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 RAD51CO43502 376 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 SLC4A1P02730 911 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 THEGLP0DJG4 465 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MLNP12872 115 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 TSHRP16473 764 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 GM2AP17900 193 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 ADRA1DP25100 572 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 GRIA1P42261 906 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 GPR1P46091 355 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 RABIFP47224 123 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 THOP1P52888 689 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MSLNQ13421 630 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MTM1Q13496 603 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 PTK2BQ14289 1009 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 KCNJ11Q14654 390 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 POU6F1Q14863 301 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 IRF4Q15306 451 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 CSRP2Q16527 193 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 SKIDA1Q1XH10 827 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 PCID2Q5JVF3 399 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 PLA2G2CQ5R387 149 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 CERCAMQ5T4B2 595 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 IZUMO3Q5VZ72 239 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 KYAT3Q6YP21 454 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 NLRP9Q7RTR0 991 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 ABI3BPQ7Z7G0 1075 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 HOOK3Q86VS8 718 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MMGT1Q8N4V1 131 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 SNF8Q96H20 258 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 C19orf43Q9BQ61 176 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 APOOQ9BUR5 198 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 FRMD8Q9BZ67 464 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 TRIM31Q9BZY9 425 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 IL17CQ9P0M4 197 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 CD84Q9UIB8 345 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 CA5BQ9Y2D0 317 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 ANKRD6Q9Y2G4 727 aa11.88□□□□□ -0.51
SPTLC1-202ENST00000337841 ABCA7Q8IZY2 2146 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 TCRBV7S3A2A0A539 114 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 POM121BA6NF01 834 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 CACNB4O00305 520 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PCCBP05166 539 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 HOXC4P09017 264 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 BPIP17213 487 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 KELP23276 732 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 IVDP26440 423 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 HTR1BP28222 390 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 TEAD1P28347 426 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 IGFALSP35858 605 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 TRIM23P36406 574 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 HADHAP40939 763 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ATXN3P54252 364 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PFN3P60673 137 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 IRX4P78413 519 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 CALCOCO2Q13137 446 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms