RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CNPY4Q8N129 248 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 GPR150Q8NGU9 434 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 GDAP1Q8TB36 358 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 TCP10LQ8TDR4 215 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 APOPT1Q96IL0 206 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 MCCC1Q96RQ3 725 aaPredicted RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 LYSMD1Q96S90 227 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 GPR22Q99680 433 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 C12orf65Q9H3J6 166 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 FAM96AQ9H5X1 160 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SNX15Q9NRS6 342 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 B4GALT6Q9UBX8 382 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SARDHQ9UL12 918 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 C16orf96A6NNT2 1141 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 S1PR4O95977 384 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 ASGR2P07307 311 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 TIMP2P16035 220 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 PEX6Q13608 980 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SEMA3AQ14563 771 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 ELAVL3Q14576 367 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 USP10Q14694 798 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 PPM1JQ5JR12 505 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 CHPFQ8IZ52 775 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 ZNF513Q8N8E2 541 aaPredicted RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 ELMO2Q96JJ3 720 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 IQCGQ9H095 443 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 VPS11Q9H270 941 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 HEBP1Q9NRV9 189 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SUN2Q9UH99 717 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 FAM95CA0A1B0GW59 222 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 A6NNZ2 444 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 ZWINTO95229 277 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 IL1BP01584 269 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 CTHP32929 405 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 TIE1P35590 1138 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 CCNFP41002 786 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 TNFRSF4P43489 277 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 CCT5P48643 541 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 CDKN1CP49918 316 aaPredicted RBP14.67□□□□□ -0.06
CBX3-201ENST00000337620 PDE1CQ14123 709 aaPredicted RBP14.67□□□□□ -0.06
CBX3-201ENST00000337620 TUBB8Q3ZCM7 444 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 SLC41A1Q8IVJ1 513 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 PIP4K2CQ8TBX8 421 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 ACMSDQ8TDX5 336 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 DENND1AQ8TEH3 1009 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
CBX3-201ENST00000337620 FAM129BQ96TA1 746 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 SLC17A7Q9P2U7 560 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 CRYL1Q9Y2S2 319 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 STARD13Q9Y3M8 1113 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 SLC30A1Q9Y6M5 507 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 STON1Q9Y6Q2 735 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 PIAS3Q9Y6X2 628 aa14.67□□□□□ -0.06
CBX3-201ENST00000337620 UPK3BL1B0FP48 263 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 UPK3BL2E5RIL1 263 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 K7EQS6 105 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 LHCGRP22888 699 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 FOXN2P32314 431 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 METAP1P53582 386 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 SLC18A1P54219 525 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PTSQ03393 145 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 ARHGEF7Q14155 803 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 FAM151BQ6UXP7 276 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 CDHR3Q6ZTQ4 885 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 RAPH1Q70E73 1250 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 DEFB123Q8N688 67 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 TMIEQ8NEW7 156 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PBXIP1Q96AQ6 731 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 CENPTQ96BT3 561 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 SGSM3Q96HU1 749 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 GUCD1Q96NT3 240 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 NDNQ99608 321 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PCDH12Q9NPG4 1184 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PRSS16Q9NQE7 514 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 DKK3Q9UBP4 350 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PPM1HQ9ULR3 514 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 MUC22E2RYF6 1773 aaPredicted RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 TCF20Q9UGU0 1960 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 TSPAN11A1L157 253 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 H7C0S8 307 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 TM9SF1O15321 606 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 SHOX2O60902 331 aaPredicted RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 TOP3BO95985 862 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 CHRM1P11229 460 aaPredicted RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 CYP2A6P11509 494 aaPredicted RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 HNRNPLP14866 589 aaKnown RBP eCLIP14.66□□□□□ -0.06
CBX3-201ENST00000337620 BPIP17213 487 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 OGNP20774 298 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 NFKBIAP25963 317 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 LSP1P33241 339 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 GMPRP36959 345 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 NEK3P51956 506 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 STC1P52823 247 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PGGT1BP53609 377 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 WDR4P57081 412 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 XIAPP98170 497 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PON2Q15165 354 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms